Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL138820.1-201ENST00000617901 5305 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL121657.1-201ENST00000327215 531 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RNU5F-7P-201ENST00000363696 115 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 MIR550A3-201ENST00000390735 95 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL133270.1-201ENST00000402635 279 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RNU2-28P-201ENST00000410457 189 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC008280.1-201ENST00000418851 412 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL590762.4-201ENST00000425885 253 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 USP9YP14-201ENST00000430663 563 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 BMS1P19-201ENST00000433925 393 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 MTND4P6-201ENST00000438297 472 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 ELOCP10-201ENST00000440624 327 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RPL10P17-201ENST00000453852 316 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 MTND5P29-201ENST00000458676 1807 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP269-201ENST00000459032 137 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AP000942.1-201ENST00000463969 747 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC010301.1-201ENST00000473936 355 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 OR4G11P-201ENST00000492842 939 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 OR5D15P-201ENST00000531671 942 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC005868.1-201ENST00000536421 331 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 CR383658.2-201ENST00000547576 1525 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC090502.2-201ENST00000549267 280 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL390726.5-202ENST00000564800 256 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC093591.2-201ENST00000565254 3843 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 LINC00561-201ENST00000565815 2738 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC083843.2-201ENST00000568248 6253 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 ZNF415P1-201ENST00000582279 1166 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC090181.2-201ENST00000602975 672 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC123786.2-201ENST00000603459 275 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 ELOCP34-201ENST00000604436 327 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC010424.2-201ENST00000607594 443 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC025594.3-201ENST00000613068 790 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 EIF3FP1-201ENST00000613970 806 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC010678.1-201ENST00000614118 713 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC015540.1-201ENST00000615828 501 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC091905.4-201ENST00000623432 202 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL022311.1-201ENST00000623726 19416 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 CR381572.2-201ENST00000624852 397 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 AC025048.6-202ENST00000627667 438 ntBASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.59□□□□□ -1.67
CTHRC1Q96CG8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CTHRC1Q96CG8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CTHRC1Q96CG8 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC008758.3-201ENST00000507003 1829 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 MTCO1P23-201ENST00000415223 1526 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTHRC1Q96CG8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms