Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RNU6-213P-201ENST00000384051 104 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RNU1-89P-201ENST00000384592 164 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 ZNF603P-201ENST00000405613 487 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 HMGB3P18-201ENST00000406327 590 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RPS12P23-201ENST00000419579 400 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 PNRC2P1-201ENST00000423940 420 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AL390879.2-203ENST00000426943 1121 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 EIF2S2P3-201ENST00000428356 999 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC005189.1-201ENST00000431286 310 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 SETD6P1-201ENST00000444575 317 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 HMGB1P16-201ENST00000447155 540 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RN7SKP283-201ENST00000517197 270 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 HMGB1P23-201ENST00000518743 568 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC015726.1-201ENST00000602353 681 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 NTAN1P1-201ENST00000603150 646 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 ZYXP1-201ENST00000617638 118 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 AC091905.1-201ENST00000624400 311 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 IQCB2P-201ENST00000401788 1633 ntBASIC3.68□□□□□ -1.82
UBE2E3Q969T4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UBE2E3Q969T4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC017007.4-201ENST00000503353 1352 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 OR10J6P-201ENST00000289731 930 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 OR52E6-202ENST00000379946 954 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 HMGN2P8-201ENST00000391458 268 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 PPIAP31-201ENST00000405422 495 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 UBE2V1P11-201ENST00000411559 285 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 OR9M1P-201ENST00000459641 921 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 RN7SL132P-201ENST00000478131 296 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC008494.2-201ENST00000514544 370 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC107016.1-201ENST00000550463 337 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC007224.1-201ENST00000564410 144 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 MIR4286-201ENST00000580651 93 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC079880.2-201ENST00000603790 1213 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AL390816.3-201ENST00000604527 1066 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AL021368.1-201ENST00000607490 540 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 OR6R2P-201ENST00000609216 300 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC099669.2-201ENST00000616549 437 ntBASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.67□□□□□ -1.82
UBE2E3Q969T4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 RNU6-1005P-201ENST00000384519 107 ntBASIC3.66□□□□□ -1.82
UBE2E3Q969T4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
UBE2E3Q969T4 AC004987.3-201ENST00000413879 771 ntBASIC3.66□□□□□ -1.82
UBE2E3Q969T4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms