Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC104662.1-201ENST00000604448 511 ntBASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 AC114878.2-201ENST00000604863 1251 ntBASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 AC017104.5-201ENST00000637647 639 ntBASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 AC027287.1-201ENST00000553115 1453 ntBASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LDLRAP1Q5SW96 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP130-201ENST00000364431 114 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP317-201ENST00000410176 116 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNU4-27P-201ENST00000410889 139 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP311-201ENST00000411290 116 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 PRELID3BP11-201ENST00000414230 479 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL356095.1-201ENST00000417217 199 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RPS12P23-201ENST00000419579 400 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 OR5BE1P-201ENST00000425977 939 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 SETP6-201ENST00000479329 568 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 IGBP1P5-201ENST00000507524 1000 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 KRT19P6-201ENST00000510983 209 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP315-201ENST00000516340 116 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP312-201ENST00000517068 116 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 RNA5SP108-201ENST00000605921 117 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL359535.1-201ENST00000612100 1087 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AC073569.3-201ENST00000619055 682 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AL356094.1-201ENST00000624663 1212 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 OR5BE1P-202ENST00000641168 1176 ntBASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.03□□□□□ -1.76
LDLRAP1Q5SW96 CASC19-261ENST00000641853 1638 ntBASIC4.03□□□□□ -1.77
LDLRAP1Q5SW96 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 RNU6-1293P-201ENST00000384077 107 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 PRRC2CP1-201ENST00000404428 159 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 OR8G2P-201ENST00000412796 908 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC115285.1-201ENST00000424879 736 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AL390879.2-203ENST00000426943 1121 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 RPL37P1-201ENST00000432310 284 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AL356276.2-201ENST00000435919 558 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 HMGB1P16-201ENST00000447155 540 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 RPL5P32-201ENST00000454085 879 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC008280.2-201ENST00000455473 307 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 PRELID3BP5-201ENST00000508612 460 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 HMGB1P23-201ENST00000518743 568 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 PTP4A1P6-201ENST00000531034 478 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AP000916.1-201ENST00000533869 835 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC124283.4-201ENST00000581815 456 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 AC113194.1-201ENST00000606037 500 ntBASIC4.02□□□□□ -1.77
LDLRAP1Q5SW96 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms