Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.86□□□□□ -1.15
ATN1P54259 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.86□□□□□ -1.15
ATN1P54259 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.86□□□□□ -1.15
ATN1P54259 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC7.86□□□□□ -1.15
ATN1P54259 UBBP5-201ENST00000446970 266 ntBASIC7.86□□□□□ -1.15
ATN1P54259 AC022133.1-201ENST00000490961 571 ntBASIC7.86□□□□□ -1.15
ATN1P54259 AC074250.1-201ENST00000511117 192 ntBASIC7.86□□□□□ -1.15
ATN1P54259 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC7.86□□□□□ -1.15
ATN1P54259 RNU6-202P-201ENST00000515998 96 ntBASIC7.86□□□□□ -1.15
ATN1P54259 AC026458.1-201ENST00000564330 438 ntBASIC7.86□□□□□ -1.15
ATN1P54259 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.86□□□□□ -1.15
ATN1P54259 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
ATN1P54259 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7.86□□□□□ -1.15
ATN1P54259 RN7SL261P-201ENST00000613441 282 ntBASIC7.86□□□□□ -1.15
ATN1P54259 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC7.86□□□□□ -1.15
ATN1P54259 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.86□□□□□ -1.15
ATN1P54259 AC005514.1-201ENST00000623521 208 ntBASIC7.86□□□□□ -1.15
ATN1P54259 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
ATN1P54259 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
ATN1P54259 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 ARMC3-203ENST00000409049 2479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC7.86□□□□□ -1.15
ATN1P54259 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.86□□□□□ -1.15
ATN1P54259 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ATN1P54259 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 Y_RNA.143-201ENST00000363520 106 ntBASIC7.85□□□□□ -1.15
ATN1P54259 RNU6-188P-201ENST00000364207 107 ntBASIC7.85□□□□□ -1.15
ATN1P54259 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.85□□□□□ -1.15
ATN1P54259 RPL36P1-201ENST00000419720 225 ntBASIC7.85□□□□□ -1.15
ATN1P54259 VTI1BP4-201ENST00000427516 527 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.85□□□□□ -1.15
ATN1P54259 AC010881.1-201ENST00000433830 235 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC073410.1-201ENST00000435125 589 ntBASIC7.85□□□□□ -1.15
ATN1P54259 RPL7AP71-201ENST00000451120 739 ntBASIC7.85□□□□□ -1.15
ATN1P54259 ISCUP1-201ENST00000454451 448 ntBASIC7.85□□□□□ -1.15
ATN1P54259 BX323845.2-201ENST00000458382 234 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC021382.1-201ENST00000483523 359 ntBASIC7.85□□□□□ -1.15
ATN1P54259 UBA52P3-201ENST00000491303 382 ntBASIC7.85□□□□□ -1.15
ATN1P54259 IGHVIII-67-3-201ENST00000517650 232 ntBASIC7.85□□□□□ -1.15
ATN1P54259 FAM60DP-201ENST00000524174 632 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC063949.1-201ENST00000552900 865 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AP003115.1-201ENST00000569849 463 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.85□□□□□ -1.15
ATN1P54259 MIR4282-201ENST00000583613 67 ntBASIC7.85□□□□□ -1.15
ATN1P54259 AC017100.2-201ENST00000584628 355 ntBASIC7.85□□□□□ -1.15
ATN1P54259 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.85□□□□□ -1.15
ATN1P54259 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 MIR6729-201ENST00000618194 65 ntBASIC7.85□□□□□ -1.15
ATN1P54259 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.85□□□□□ -1.15
ATN1P54259 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.85□□□□□ -1.15
ATN1P54259 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ATN1P54259 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.84□□□□□ -1.15
ATN1P54259 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 AP003486.1-201ENST00000525716 3994 ntBASIC7.84□□□□□ -1.15
ATN1P54259 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.84□□□□□ -1.15
ATN1P54259 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ATN1P54259 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.84□□□□□ -1.15
ATN1P54259 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.84□□□□□ -1.15
ATN1P54259 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.84□□□□□ -1.15
ATN1P54259 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.84□□□□□ -1.15
ATN1P54259 RNU6-595P-201ENST00000363944 107 ntBASIC7.84□□□□□ -1.15
ATN1P54259 RNU6-923P-201ENST00000364753 107 ntBASIC7.84□□□□□ -1.15
ATN1P54259 RNU6-1055P-201ENST00000391085 107 ntBASIC7.84□□□□□ -1.15
ATN1P54259 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
ATN1P54259 AL133384.1-201ENST00000412744 351 ntBASIC7.84□□□□□ -1.15
ATN1P54259 RPS12P5-201ENST00000423449 371 ntBASIC7.84□□□□□ -1.15
ATN1P54259 TOMM20P4-201ENST00000427861 435 ntBASIC7.84□□□□□ -1.15
ATN1P54259 AC016696.1-201ENST00000446949 318 ntBASIC7.84□□□□□ -1.15
ATN1P54259 AL137159.1-201ENST00000452808 512 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms