Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AP000238.1-201ENST00000608759 426 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL353726.1-201ENST00000614041 1000 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC023509.5-201ENST00000617434 807 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 AC034229.5-201ENST00000624258 185 ntBASIC4.18□□□□□ -1.74
PDX1P52945 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.18□□□□□ -1.74
PDX1P52945 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 OR8B1P-202ENST00000641132 1178 ntBASIC4.18□□□□□ -1.74
PDX1P52945 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDX1P52945 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PDX1P52945 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDX1P52945 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDX1P52945 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
PDX1P52945 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 AC005332.5-201ENST00000591222 2919 ntBASIC4.17□□□□□ -1.74
PDX1P52945 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDX1P52945 IL6STP1-201ENST00000346911 1020 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RNU1-87P-201ENST00000363727 170 ntBASIC4.17□□□□□ -1.74
PDX1P52945 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.17□□□□□ -1.74
PDX1P52945 OR1L1-202ENST00000373686 1083 ntBASIC4.17□□□□□ -1.74
PDX1P52945 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDX1P52945 RNU6-224P-201ENST00000384055 107 ntBASIC4.17□□□□□ -1.74
PDX1P52945 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PDX1P52945 RNA5SP372-201ENST00000390836 115 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.17□□□□□ -1.74
PDX1P52945 AC097374.1-203ENST00000400783 485 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RN7SKP33-201ENST00000410942 340 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RNU6-575P-201ENST00000411326 105 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC009237.10-201ENST00000414112 510 ntBASIC4.17□□□□□ -1.74
PDX1P52945 MTATP6P20-201ENST00000414147 562 ntBASIC4.17□□□□□ -1.74
PDX1P52945 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RAC1P8-201ENST00000427086 527 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 MTCYBP42-201ENST00000444653 1130 ntBASIC4.17□□□□□ -1.74
PDX1P52945 Z95327.1-201ENST00000446082 482 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RPS27AP15-201ENST00000447672 466 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 NAP1L1P3-201ENST00000462291 880 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC006511.1-201ENST00000470614 315 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 RN7SL809P-201ENST00000482040 297 ntBASIC4.17□□□□□ -1.74
PDX1P52945 MTCO3P35-201ENST00000485582 781 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RPS27P23-201ENST00000487608 251 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 AC020699.1-201ENST00000505161 445 ntBASIC4.17□□□□□ -1.74
PDX1P52945 HPRT1P2-201ENST00000505250 544 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC021146.3-201ENST00000511911 260 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RNA5SP497-201ENST00000516081 97 ntBASIC4.17□□□□□ -1.74
PDX1P52945 RNA5SP519-201ENST00000516480 119 ntBASIC4.17□□□□□ -1.74
PDX1P52945 DEFB130C-202ENST00000530001 230 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC107918.3-201ENST00000533272 382 ntBASIC4.17□□□□□ -1.74
PDX1P52945 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.17□□□□□ -1.74
PDX1P52945 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.17□□□□□ -1.74
PDX1P52945 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 TVP23BP1-201ENST00000557500 617 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.17□□□□□ -1.74
PDX1P52945 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 PCNAP1-202ENST00000595299 752 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AL020997.3-201ENST00000602843 359 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AL583856.2-201ENST00000606298 543 ntBASIC4.17□□□□□ -1.74
PDX1P52945 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.17□□□□□ -1.74
PDX1P52945 AC009237.15-201ENST00000610252 501 ntBASIC4.17□□□□□ -1.74
PDX1P52945 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 AC006963.1-201ENST00000624003 1052 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AL109659.3-201ENST00000624985 950 ntBASIC4.17□□□□□ -1.74
PDX1P52945 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDX1P52945 MFSD8-242ENST00000641690 4199 ntBASIC4.17□□□□□ -1.74
PDX1P52945 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.17□□□□□ -1.74
PDX1P52945 LINC01109-201ENST00000603837 3081 ntBASIC4.17□□□□□ -1.74
PDX1P52945 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.17□□□□□ -1.74
PDX1P52945 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDX1P52945 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDX1P52945 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDX1P52945 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.16□□□□□ -1.74
PDX1P52945 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms