Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.03□□□□□ -1.6
NEK3P51956 TMEM248P1-201ENST00000510579 951 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.03□□□□□ -1.6
NEK3P51956 BTF3P13-201ENST00000513224 490 ntBASIC5.03□□□□□ -1.6
NEK3P51956 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.03□□□□□ -1.6
NEK3P51956 IGLVIV-53-201ENST00000520107 367 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 OR5AK1P-201ENST00000524837 922 ntBASIC5.03□□□□□ -1.6
NEK3P51956 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.03□□□□□ -1.6
NEK3P51956 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 BNIP3P24-201ENST00000593398 557 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.03□□□□□ -1.6
NEK3P51956 AC245297.2-201ENST00000610119 565 ntBASIC5.03□□□□□ -1.6
NEK3P51956 AL450489.1-201ENST00000612071 468 ntBASIC5.03□□□□□ -1.6
NEK3P51956 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
NEK3P51956 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NEK3P51956 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.03□□□□□ -1.6
NEK3P51956 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.03□□□□□ -1.6
NEK3P51956 MTND4P34-201ENST00000572715 1371 ntBASIC5.03□□□□□ -1.6
NEK3P51956 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 MAPK10-263ENST00000641052 4307 ntBASIC5.02□□□□□ -1.61
NEK3P51956 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NEK3P51956 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NEK3P51956 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NEK3P51956 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 SNORA70.10-201ENST00000384515 134 ntBASIC5.02□□□□□ -1.61
NEK3P51956 LRRC37BP1-201ENST00000398851 714 ntBASIC5.02□□□□□ -1.61
NEK3P51956 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 RNU6-757P-201ENST00000410334 100 ntBASIC5.02□□□□□ -1.61
NEK3P51956 QRSL1P2-201ENST00000418582 964 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 AL360081.1-201ENST00000428299 555 ntBASIC5.02□□□□□ -1.61
NEK3P51956 MTATP6P17-201ENST00000431030 672 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC008072.1-201ENST00000434254 824 ntBASIC5.02□□□□□ -1.61
NEK3P51956 RPL23AP74-201ENST00000437246 471 ntBASIC5.02□□□□□ -1.61
NEK3P51956 RPL7P11-201ENST00000437586 658 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.02□□□□□ -1.61
NEK3P51956 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.02□□□□□ -1.61
NEK3P51956 RPL39P6-201ENST00000448289 150 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 RSL24D1P3-201ENST00000449255 495 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 HIGD1AP3-201ENST00000515857 278 ntBASIC5.02□□□□□ -1.61
NEK3P51956 RNU6-583P-201ENST00000516012 92 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC012339.2-201ENST00000523996 453 ntBASIC5.02□□□□□ -1.61
NEK3P51956 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.02□□□□□ -1.61
NEK3P51956 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.02□□□□□ -1.61
NEK3P51956 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 HSPE1P3-201ENST00000559254 309 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AL512347.1-201ENST00000566420 503 ntBASIC5.02□□□□□ -1.61
NEK3P51956 TVP23CP2-201ENST00000571473 623 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.02□□□□□ -1.61
NEK3P51956 MIR4637-201ENST00000582405 84 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.02□□□□□ -1.61
NEK3P51956 AC112220.3-201ENST00000605502 502 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AP001521.2-201ENST00000608772 546 ntBASIC5.02□□□□□ -1.61
NEK3P51956 AC005962.2-201ENST00000611427 652 ntBASIC5.02□□□□□ -1.61
NEK3P51956 Z99129.2-201ENST00000619967 314 ntBASIC5.02□□□□□ -1.61
NEK3P51956 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NEK3P51956 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.02□□□□□ -1.61
NEK3P51956 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NEK3P51956 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NEK3P51956 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NEK3P51956 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 AC091046.3-201ENST00000631455 1574 ntBASIC5.01□□□□□ -1.61
NEK3P51956 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.01□□□□□ -1.61
NEK3P51956 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NEK3P51956 AC008549.2-201ENST00000333482 706 ntBASIC5.01□□□□□ -1.61
NEK3P51956 RNU6-931P-201ENST00000363850 107 ntBASIC5.01□□□□□ -1.61
NEK3P51956 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NEK3P51956 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.01□□□□□ -1.61
NEK3P51956 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.01□□□□□ -1.61
NEK3P51956 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms