Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 AC023389.2-201ENST00000580031 955 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
BRCA2P51587 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.54□□□□□ -1.84
BRCA2P51587 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 AC010503.3-201ENST00000594355 540 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 AC015849.2-201ENST00000605738 409 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 uc_338.25-201ENST00000613756 156 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.54□□□□□ -1.84
BRCA2P51587 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
BRCA2P51587 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.54□□□□□ -1.84
BRCA2P51587 AC005229.2-201ENST00000456995 399 ntBASIC3.54□□□□□ -1.84
BRCA2P51587 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.54□□□□□ -1.84
BRCA2P51587 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
BRCA2P51587 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
BRCA2P51587 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
BRCA2P51587 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BRCA2P51587 AL672167.1-206ENST00000356293 943 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.53□□□□□ -1.84
BRCA2P51587 HMGN2P27-201ENST00000427352 270 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.53□□□□□ -1.84
BRCA2P51587 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.53□□□□□ -1.84
BRCA2P51587 AC005798.1-201ENST00000513715 387 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.53□□□□□ -1.84
BRCA2P51587 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BRCA2P51587 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.53□□□□□ -1.84
BRCA2P51587 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.53□□□□□ -1.84
BRCA2P51587 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
BRCA2P51587 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
BRCA2P51587 AC017037.2-201ENST00000513850 890 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC009812.2-201ENST00000517657 457 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC018552.3-201ENST00000567416 561 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC025754.2-201ENST00000606491 432 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC083843.3-201ENST00000623679 2186 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.53□□□□□ -1.84
BRCA2P51587 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.53□□□□□ -1.84
BRCA2P51587 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.53□□□□□ -1.85
BRCA2P51587 TRGV5P-201ENST00000419915 354 ntBASIC3.53□□□□□ -1.85
BRCA2P51587 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.53□□□□□ -1.85
BRCA2P51587 EEF1A1P37-201ENST00000522748 715 ntBASIC3.53□□□□□ -1.85
BRCA2P51587 AC138832.1-201ENST00000522871 556 ntBASIC3.53□□□□□ -1.85
BRCA2P51587 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
BRCA2P51587 AC098826.3-201ENST00000603823 466 ntBASIC3.53□□□□□ -1.85
BRCA2P51587 AC007619.2-201ENST00000605743 379 ntBASIC3.53□□□□□ -1.85
BRCA2P51587 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.85
BRCA2P51587 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 AL513302.2-201ENST00000562313 1842 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 DPPA2P2-201ENST00000418220 897 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.52□□□□□ -1.85
BRCA2P51587 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.52□□□□□ -1.85
BRCA2P51587 AC008549.1-201ENST00000512900 643 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 AL035413.2-201ENST00000604801 525 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 DMD-211ENST00000378707 7410 ntTSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 NAMPTP1-201ENST00000440465 2514 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.52□□□□□ -1.85
BRCA2P51587 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.52□□□□□ -1.85
BRCA2P51587 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 AC097504.1-201ENST00000515103 2415 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 RAP1BP1-201ENST00000412709 553 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 GSTM3P2-201ENST00000412746 530 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 SCARNA20.6-201ENST00000517251 106 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 AC010306.1-201ENST00000523223 1117 ntBASIC3.52□□□□□ -1.85
BRCA2P51587 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
BRCA2P51587 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.52□□□□□ -1.85
BRCA2P51587 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
BRCA2P51587 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
BRCA2P51587 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRCA2P51587 SEPT7P8-201ENST00000413308 775 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 RPS3P1-201ENST00000456781 192 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 HIGD1AP13-201ENST00000509878 289 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms