Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 OR4F13P-202ENST00000560066 2054 ntBASIC5.48□□□□□ -1.53
LTBRP36941 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.48□□□□□ -1.53
LTBRP36941 GSTA9P-201ENST00000406231 611 ntBASIC5.48□□□□□ -1.53
LTBRP36941 MIR1305-201ENST00000408300 86 ntBASIC5.48□□□□□ -1.53
LTBRP36941 RN7SKP266-201ENST00000410232 287 ntBASIC5.48□□□□□ -1.53
LTBRP36941 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 AL512326.1-201ENST00000443050 721 ntBASIC5.48□□□□□ -1.53
LTBRP36941 MTND6P13-201ENST00000443510 523 ntBASIC5.48□□□□□ -1.53
LTBRP36941 GAPDHP17-201ENST00000449858 1001 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 BTF3P5-201ENST00000457252 467 ntBASIC5.48□□□□□ -1.53
LTBRP36941 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 AC112204.1-201ENST00000502591 103 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AC022447.3-201ENST00000506865 495 ntBASIC5.48□□□□□ -1.53
LTBRP36941 RN7SKP260-201ENST00000516907 149 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AC134698.5-201ENST00000519444 336 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 AC122688.1-201ENST00000541494 223 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.48□□□□□ -1.53
LTBRP36941 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 AC006338.1-201ENST00000618453 749 ntBASIC5.48□□□□□ -1.53
LTBRP36941 AC068880.5-201ENST00000624331 290 ntBASIC5.48□□□□□ -1.53
LTBRP36941 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LTBRP36941 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 AC020633.1-201ENST00000468439 2247 ntBASIC5.48□□□□□ -1.53
LTBRP36941 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.48□□□□□ -1.53
LTBRP36941 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LTBRP36941 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
LTBRP36941 RNU6-797P-201ENST00000363101 109 ntBASIC5.47□□□□□ -1.53
LTBRP36941 RNU1-85P-201ENST00000364127 164 ntBASIC5.47□□□□□ -1.53
LTBRP36941 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LTBRP36941 HMGB1P17-201ENST00000403495 628 ntBASIC5.47□□□□□ -1.53
LTBRP36941 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBRP36941 GSTM3P2-201ENST00000412746 530 ntBASIC5.47□□□□□ -1.53
LTBRP36941 BX295541.1-201ENST00000417774 250 ntBASIC5.47□□□□□ -1.53
LTBRP36941 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBRP36941 AL358934.1-201ENST00000432346 324 ntBASIC5.47□□□□□ -1.53
LTBRP36941 BTF3P10-201ENST00000433415 495 ntBASIC5.47□□□□□ -1.53
LTBRP36941 YWHAZP8-201ENST00000436935 731 ntBASIC5.47□□□□□ -1.53
LTBRP36941 AL451074.3-201ENST00000437709 472 ntBASIC5.47□□□□□ -1.53
LTBRP36941 SNRPEP8-201ENST00000442866 260 ntBASIC5.47□□□□□ -1.53
LTBRP36941 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 MTND5P20-201ENST00000448677 143 ntBASIC5.47□□□□□ -1.53
LTBRP36941 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBRP36941 MTND2P24-201ENST00000453434 806 ntBASIC5.47□□□□□ -1.53
LTBRP36941 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LTBRP36941 RN7SL244P-201ENST00000493405 297 ntBASIC5.47□□□□□ -1.53
LTBRP36941 FTH1P8-201ENST00000498161 514 ntBASIC5.47□□□□□ -1.53
LTBRP36941 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.47□□□□□ -1.53
LTBRP36941 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBRP36941 Y_RNA.702-201ENST00000516843 96 ntBASIC5.47□□□□□ -1.53
LTBRP36941 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.47□□□□□ -1.53
LTBRP36941 OR5M2P-201ENST00000529003 936 ntBASIC5.47□□□□□ -1.53
LTBRP36941 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.47□□□□□ -1.53
LTBRP36941 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.47□□□□□ -1.53
LTBRP36941 AL391840.1-201ENST00000571144 367 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms