Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 MIR383-201ENST00000362257 73 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 SNORA70.2-201ENST00000364506 135 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AP002784.2-201ENST00000397300 549 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AL161909.1-201ENST00000397390 712 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC069218.2-201ENST00000411665 344 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 HSFY3P-201ENST00000444242 1191 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 RPS26P56-201ENST00000444468 240 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 RPL7AP28-201ENST00000464513 571 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 RPS4XP6-201ENST00000477670 797 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC091167.1-201ENST00000492017 396 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 VWA8P1-201ENST00000510889 176 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 HIGD1AP6-201ENST00000521833 279 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 HMGB1P1-201ENST00000522557 636 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 IGJP1-201ENST00000522682 475 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC124293.1-201ENST00000530034 493 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC069240.1-201ENST00000548774 375 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC004217.3-201ENST00000551552 878 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 MIR3939-201ENST00000582614 106 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 HMGN2P28-201ENST00000606102 262 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 MIR6716-201ENST00000613413 80 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 uc_338.32-201ENST00000615087 172 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 AC106730.3-201ENST00000624568 641 ntBASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DPA1P20036 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AL512283.1-201ENST00000606756 1384 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 RNA5SP388-201ENST00000362584 119 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 RNA5SP502-201ENST00000362694 119 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC068538.1-201ENST00000376856 336 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 SNORD65C-201ENST00000390962 71 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 ZNF603P-201ENST00000405613 487 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC005517.2-201ENST00000424673 553 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC115285.1-201ENST00000424879 736 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 COX6B1P7-201ENST00000430845 235 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC010881.1-201ENST00000433830 235 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 GTF2IP12-201ENST00000456547 356 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 RPS15AP1-201ENST00000457423 391 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 EIF2S2P5-201ENST00000457635 968 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC010618.1-201ENST00000469924 477 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC092045.1-201ENST00000495716 1231 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC020593.1-201ENST00000507399 299 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC121161.1-201ENST00000510606 652 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 PARP1P2-201ENST00000556806 195 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC022655.2-201ENST00000577280 318 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC069366.1-201ENST00000583159 838 ntBASIC4.2□□□□□ -1.74
HLA-DPA1P20036 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HLA-DPA1P20036 AC026741.1-201ENST00000605892 482 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms