Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RCCD1A6NED2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RCCD1A6NED2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RCCD1A6NED2 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.06□□□□□ -1.28
RCCD1A6NED2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RCCD1A6NED2 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 HSPD1P8-201ENST00000400121 1658 ntBASIC7.06□□□□□ -1.28
RCCD1A6NED2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
RCCD1A6NED2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RCCD1A6NED2 ZNF658B-201ENST00000602828 3408 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 Y_RNA.60-201ENST00000362831 98 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 RNU6-61P-201ENST00000365528 109 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 MRPS6P2-201ENST00000381143 370 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 RNU6-729P-201ENST00000384399 107 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 MIR1252-201ENST00000408861 65 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 RN7SL216P-201ENST00000471607 298 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 TECRP2-201ENST00000503270 928 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC021146.3-201ENST00000511911 260 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC093853.1-201ENST00000515689 483 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 RNU6-182P-201ENST00000516970 105 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 IGLC4-201ENST00000517690 248 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 OR4C1P-201ENST00000530880 937 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC073916.1-201ENST00000545095 130 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 AL049779.2-201ENST00000553847 315 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 HSBP1P1-201ENST00000555205 166 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 MIR3941-201ENST00000582572 103 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 COX6CP16-201ENST00000603667 216 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 SNORD58B-201ENST00000607313 66 ntBASIC7.05□□□□□ -1.28
RCCD1A6NED2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
RCCD1A6NED2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
RCCD1A6NED2 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 OR10D1P-201ENST00000355343 936 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 Y_RNA.106-201ENST00000363189 100 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 SNORA24.1-201ENST00000384401 135 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AP003170.5-201ENST00000397185 335 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AL583834.1-201ENST00000406943 343 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AL023284.3-201ENST00000407767 334 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 RNU4-64P-201ENST00000410795 131 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 RNU6-387P-201ENST00000411331 105 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC234781.4-201ENST00000419384 244 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 CYCSP52-201ENST00000422857 310 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC007568.1-201ENST00000422912 471 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 MTND5P15-201ENST00000434246 349 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC099799.1-201ENST00000439809 192 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 AL353803.3-201ENST00000444641 335 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 RNU7-59P-201ENST00000459101 61 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC116533.1-201ENST00000459748 321 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 PLGLA-201ENST00000465668 449 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC114801.2-201ENST00000503825 781 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 MRPL49P1-201ENST00000505951 535 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AC009901.1-201ENST00000506703 541 ntBASIC7.04□□□□□ -1.28
RCCD1A6NED2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC7.04□□□□□ -1.28
RCCD1A6NED2 IGHV3-76-201ENST00000522465 295 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms