Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SALL4P2-201ENST00000423288 2910 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL359922.3-201ENST00000624779 1670 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 UBBP2-201ENST00000376781 231 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 RNU4-72P-201ENST00000410754 173 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL161449.1-201ENST00000414531 1199 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC090960.1-201ENST00000421072 306 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL365203.2-201ENST00000423444 196 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 RPS29P17-201ENST00000430795 166 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 NPM1P33-201ENST00000438918 872 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 MTND5P2-201ENST00000442927 1142 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 DHFRP3-201ENST00000455595 559 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC010468.1-201ENST00000461022 817 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC010307.1-201ENST00000467206 836 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC053481.1-201ENST00000467217 306 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC109327.1-201ENST00000471666 403 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 LINC00888-204ENST00000487386 421 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC011352.3-201ENST00000505162 593 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC104090.1-201ENST00000506341 1171 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 MTND1P22-201ENST00000510572 951 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 RNU6-513P-201ENST00000516104 104 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 RNA5SP464-201ENST00000516251 108 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 RNU6-885P-201ENST00000516607 104 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC105185.1-201ENST00000518705 535 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 PARP1P2-201ENST00000556806 195 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC090181.2-201ENST00000602975 672 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AL592221.1-201ENST00000605266 382 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC005332.6-201ENST00000613178 446 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC114781.5-201ENST00000615297 108 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 AC109315.1-201ENST00000584143 1347 ntBASIC5.13□□□□□ -1.59
COL20A1Q9P218 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.13□□□□□ -1.59
COL20A1Q9P218 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL20A1Q9P218 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 SUGT1P1-201ENST00000379514 476 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 SNORD116-23-201ENST00000384645 92 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 RSL24D1P4-201ENST00000400938 484 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 RNU6-603P-201ENST00000411403 107 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 PTP4A1P5-201ENST00000420305 455 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC092017.2-201ENST00000427600 362 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 SKP1P3-201ENST00000429280 487 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 RPL37P1-201ENST00000432310 284 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AL050321.1-201ENST00000432363 400 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 NMNAT1P2-201ENST00000435192 860 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 GTF3AP5-201ENST00000442645 697 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 MTND1P16-201ENST00000465177 898 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AL672167.3-201ENST00000465951 960 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC010618.1-201ENST00000469924 477 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 ACTG1P13-201ENST00000486987 1043 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 HMGB3P16-201ENST00000508037 287 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 TRAV8-5-201ENST00000537369 341 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 HIGD1AP17-201ENST00000554576 276 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC093519.1-201ENST00000566109 298 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 MIR3939-201ENST00000582614 106 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC022069.1-201ENST00000582910 658 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC096553.1-201ENST00000605169 829 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL20A1Q9P218 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC123768.4-201ENST00000616244 701 ntBASIC5.12□□□□□ -1.59
COL20A1Q9P218 AC006338.2-201ENST00000616864 791 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms