Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPL23AP47-201ENST00000408017 460 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC104837.2-201ENST00000427236 424 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RAB11AP1-201ENST00000442978 646 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC079168.2-201ENST00000453977 416 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SL610P-201ENST00000463845 291 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RPS3AP43-201ENST00000479743 781 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC025164.1-201ENST00000496249 478 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 FTH1P24-201ENST00000503502 462 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP276-201ENST00000516242 268 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 RNA5SP360-201ENST00000516555 118 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC105185.1-201ENST00000518705 535 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AP001189.2-201ENST00000527320 189 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 BRD9P1-201ENST00000529855 560 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC135279.1-201ENST00000543493 504 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 OR4K7P-201ENST00000580232 945 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 SALL4P2-201ENST00000423288 2910 ntBASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDK5RAP3Q96JB5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AP001642.1-201ENST00000624727 2117 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL592182.3-201ENST00000642132 3304 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 DHX9P1-201ENST00000436565 3076 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 ZFRP1-201ENST00000457579 2970 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP115-201ENST00000363177 317 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 SNORD116-23-201ENST00000384645 92 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL590762.2-201ENST00000395798 571 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 ARL4AP5-201ENST00000404372 599 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 RN7SKP125-201ENST00000410481 302 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC007394.1-201ENST00000421941 531 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL645608.4-201ENST00000423619 154 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 SKP1P3-201ENST00000429280 487 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 UBE2D3P4-201ENST00000441973 436 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 RPL12P26-201ENST00000452430 487 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 RNA5SP103-201ENST00000459503 118 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC090142.1-201ENST00000465776 462 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 RNU6-232P-201ENST00000517144 64 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AP005119.2-201ENST00000579735 1105 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 MIR4999-201ENST00000585029 91 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC110760.3-201ENST00000598794 467 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC015726.1-201ENST00000602353 681 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AL022161.1-201ENST00000604390 213 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC084782.3-201ENST00000612282 578 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC009090.3-201ENST00000616553 565 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC073348.1-201ENST00000623002 331 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC079248.2-201ENST00000623779 326 ntBASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDK5RAP3Q96JB5 MAPK10-303ENST00000641324 3959 ntBASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDK5RAP3Q96JB5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms