Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.43□□□□□ -1.54
CFAP43Q8NDM7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.43□□□□□ -1.54
CFAP43Q8NDM7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CFAP43Q8NDM7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.43□□□□□ -1.54
CFAP43Q8NDM7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 RNU6-283P-201ENST00000364788 107 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 SNORA44-201ENST00000384584 132 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 OOSP1P1-201ENST00000423265 274 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 RPS29P31-201ENST00000446147 164 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 MIR3945-201ENST00000581853 98 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 AC119744.1-201ENST00000454746 1715 ntBASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CFAP43Q8NDM7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 MIR448-201ENST00000362131 111 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 HMGN2P8-201ENST00000391458 268 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 BX842559.1-201ENST00000419615 532 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 U3.44-201ENST00000458938 192 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 AC006272.2-201ENST00000594725 163 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 AC138932.5-201ENST00000617759 563 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 AC103858.2-201ENST00000621471 543 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 AC005183.1-201ENST00000603687 1979 ntBASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CFAP43Q8NDM7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 RSL24D1P1-201ENST00000404972 493 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 AL024507.1-201ENST00000412741 274 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 AC092447.2-201ENST00000435487 669 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 AC097262.1-201ENST00000452559 548 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 AC005798.1-201ENST00000513715 387 ntBASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.4□□□□□ -1.54
CFAP43Q8NDM7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 FTLP6-201ENST00000355274 422 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AL136131.1-201ENST00000406079 803 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 NPM1P39-201ENST00000449818 867 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 RPS3AP50-201ENST00000487064 803 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AC020914.4-201ENST00000597690 277 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AC073657.2-201ENST00000605661 303 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AL359715.5-201ENST00000623431 443 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 AL732372.2-225ENST00000642124 456 ntBASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CFAP43Q8NDM7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 HMGB1P21-201ENST00000502313 581 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 AC112198.1-201ENST00000505369 1220 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 FCF1P8-201ENST00000510322 597 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 RPL12P22-201ENST00000519073 490 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 CR383656.14-201ENST00000551951 406 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 AC006946.3-201ENST00000609791 756 ntBASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CFAP43Q8NDM7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 AL158071.1-201ENST00000430315 461 ntBASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 AC005229.2-201ENST00000456995 399 ntBASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 OR1AB1P-201ENST00000585564 761 ntBASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 MIR4727-201ENST00000622232 55 ntBASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 BMS1P21-201ENST00000634565 365 ntBASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms