Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CDC27P1-201ENST00000445384 715 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 RPL7P31-201ENST00000450192 724 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AL645939.1-201ENST00000453429 797 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 GAPDHP36-201ENST00000480688 918 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 CDH12P2-201ENST00000504393 298 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC010342.1-201ENST00000514047 877 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 RNU6-1308P-201ENST00000516817 103 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 IGKV2-38-201ENST00000517443 247 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 YPEL5P3-201ENST00000547227 352 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC022968.1-201ENST00000567372 442 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 DNAJC19P3-201ENST00000594491 331 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC015726.1-201ENST00000602353 681 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 SUMO2P14-201ENST00000604488 293 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC078899.5-201ENST00000612475 178 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC099669.2-201ENST00000616549 437 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AC073530.2-201ENST00000623987 261 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
RFWD3Q6PCD5 CASC19-284ENST00000642142 1868 ntBASIC4.09□□□□□ -1.76
RFWD3Q6PCD5 BDP1P-201ENST00000582658 1990 ntBASIC4.09□□□□□ -1.76
RFWD3Q6PCD5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.09□□□□□ -1.76
RFWD3Q6PCD5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RFWD3Q6PCD5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SNORA63.3-201ENST00000362682 132 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 HMGB1P10-201ENST00000395823 563 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SNORA11-201ENST00000408789 128 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 TATDN1P1-201ENST00000414123 891 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RPL36AP36-201ENST00000418616 301 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 OR6K4P-201ENST00000423179 955 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 HIGD1AP4-201ENST00000430194 280 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 CACYBPP1-201ENST00000438592 684 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RNFT1P2-201ENST00000443064 757 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 MTCYBP21-201ENST00000443300 1113 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AL359073.1-201ENST00000448036 403 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 HMGB1P5-202ENST00000451497 985 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 HMGB3P21-201ENST00000452483 547 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 OR9M1P-201ENST00000459641 921 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC021205.1-201ENST00000468797 348 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC092902.1-201ENST00000486999 259 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RNU6-347P-201ENST00000516658 105 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RNU6-352P-201ENST00000516908 107 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 NARSP2-201ENST00000518524 679 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 NDUFA5P2-201ENST00000519723 344 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 MTCO1P4-201ENST00000520516 1409 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AP002001.2-201ENST00000529025 1469 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC006518.1-201ENST00000541449 943 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AL049870.4-201ENST00000555741 486 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC005255.1-201ENST00000593748 216 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 PSMA6P4-201ENST00000603247 718 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AL391262.2-201ENST00000622466 494 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 AC124312.6-202ENST00000623624 418 ntBASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFWD3Q6PCD5 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms