Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC104162.1-201ENST00000430831 2382 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.80-201ENST00000362996 102 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.288-201ENST00000364854 92 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 Y_RNA.350-201ENST00000365409 98 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RPL23AP32-201ENST00000395315 459 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AL591416.1-201ENST00000404015 867 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RN7SKP158-201ENST00000410453 326 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RPL37P10-201ENST00000412884 288 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 HMGB3P10-201ENST00000434734 572 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RPS15AP9-201ENST00000439856 381 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AL390119.1-201ENST00000440329 312 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CEACAMP9-201ENST00000442990 513 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RNU7-63P-201ENST00000459054 62 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC017015.1-201ENST00000477387 286 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RPS4XP1-201ENST00000482189 787 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC007686.1-201ENST00000488511 463 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 FAM206BP-201ENST00000510179 541 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC106800.3-201ENST00000511389 308 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RNU6-182P-201ENST00000516970 105 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC023157.2-201ENST00000540596 141 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AP002373.2-201ENST00000541631 1060 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC010547.7-201ENST00000570323 333 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 SNORA70D-201ENST00000578836 135 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC012254.3-201ENST00000591183 2117 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AL133338.2-201ENST00000604292 736 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RNU6-89P-201ENST00000606519 100 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RN7SL544P-201ENST00000617232 284 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 RN7SL763P-201ENST00000620922 284 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AP000346.3-201ENST00000622821 210 ntBASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.91□□□□□ -1.46
RSPO4Q2I0M5 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RNF6P1-201ENST00000444889 1784 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AP004289.2-201ENST00000444413 1457 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AC105114.1-201ENST00000624795 1862 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RNA5SP375-201ENST00000362975 119 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RNU6-770P-201ENST00000363929 105 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RN7SKP128-201ENST00000364270 303 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 MIR640-201ENST00000385086 96 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AL390316.1-201ENST00000406279 553 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RNU4-26P-201ENST00000410270 107 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AC074085.1-201ENST00000413598 418 ntBASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.9□□□□□ -1.46
RSPO4Q2I0M5 RPL35AP3-201ENST00000414680 288 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms