Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC069304.3-201ENST00000603938 1084 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AC105429.2-201ENST00000610567 517 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AL049539.1-201ENST00000611964 459 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AL732618.1-201ENST00000623251 301 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AC007342.8-201ENST00000623278 678 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AC006065.5-201ENST00000623427 349 ntBASIC2.8□□□□□ -1.96
CCL20P78556 AC019080.5-201ENST00000624891 757 ntBASIC2.8□□□□□ -1.96
CCL20P78556 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.8□□□□□ -1.96
CCL20P78556 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCL20P78556 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCL20P78556 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCL20P78556 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCL20P78556 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCL20P78556 MIR383-201ENST00000362257 73 ntBASIC2.79□□□□□ -1.96
CCL20P78556 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCL20P78556 RNU6-317P-201ENST00000384031 107 ntBASIC2.79□□□□□ -1.96
CCL20P78556 ENSAP1-201ENST00000392855 326 ntBASIC2.79□□□□□ -1.96
CCL20P78556 ST13P16-201ENST00000401760 781 ntBASIC2.79□□□□□ -1.96
CCL20P78556 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 RNU4-6P-201ENST00000410804 122 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.79□□□□□ -1.96
CCL20P78556 AL691449.1-201ENST00000426570 421 ntBASIC2.79□□□□□ -1.96
CCL20P78556 USP9YP9-201ENST00000429406 715 ntBASIC2.79□□□□□ -1.96
CCL20P78556 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.79□□□□□ -1.96
CCL20P78556 UBE2V2P1-201ENST00000434717 398 ntBASIC2.79□□□□□ -1.96
CCL20P78556 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 AC105402.2-201ENST00000438503 358 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 EIF2S2P2-201ENST00000447161 982 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AL157827.1-201ENST00000447622 132 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 AC007967.1-201ENST00000455422 1159 ntBASIC2.79□□□□□ -1.96
CCL20P78556 CEACAMP4-201ENST00000457676 421 ntBASIC2.79□□□□□ -1.96
CCL20P78556 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 AC078817.1-201ENST00000492623 435 ntBASIC2.79□□□□□ -1.96
CCL20P78556 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
CCL20P78556 KCTD9P5-201ENST00000504141 1170 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AK3P4-201ENST00000504283 583 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.79□□□□□ -1.96
CCL20P78556 MTCO1P30-201ENST00000515244 580 ntBASIC2.79□□□□□ -1.96
CCL20P78556 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC2.79□□□□□ -1.96
CCL20P78556 RNU2-58P-201ENST00000516403 183 ntBASIC2.79□□□□□ -1.96
CCL20P78556 SNORA70.19-201ENST00000516717 90 ntBASIC2.79□□□□□ -1.96
CCL20P78556 RNU6-579P-201ENST00000516879 102 ntBASIC2.79□□□□□ -1.96
CCL20P78556 RN7SKP92-201ENST00000517266 244 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 UBE2NP1-201ENST00000545592 458 ntBASIC2.79□□□□□ -1.96
CCL20P78556 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.79□□□□□ -1.96
CCL20P78556 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.79□□□□□ -1.96
CCL20P78556 AC020915.5-201ENST00000596836 964 ntBASIC2.79□□□□□ -1.96
CCL20P78556 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 MIR8059-201ENST00000620427 81 ntBASIC2.79□□□□□ -1.96
CCL20P78556 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.79□□□□□ -1.96
CCL20P78556 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCL20P78556 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCL20P78556 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.79□□□□□ -1.96
CCL20P78556 NMD3P1-201ENST00000439704 1488 ntBASIC2.78□□□□□ -1.96
CCL20P78556 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.78□□□□□ -1.96
CCL20P78556 GABPAP-201ENST00000419271 1356 ntBASIC2.78□□□□□ -1.96
CCL20P78556 SEPT7P7-201ENST00000420492 1301 ntBASIC2.78□□□□□ -1.96
CCL20P78556 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCL20P78556 AC079741.1-201ENST00000321498 212 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPL7P26-201ENST00000333817 754 ntBASIC2.78□□□□□ -1.96
CCL20P78556 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCL20P78556 RNA5SP447-201ENST00000363749 119 ntBASIC2.78□□□□□ -1.96
CCL20P78556 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCL20P78556 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CCL20P78556 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.78□□□□□ -1.96
CCL20P78556 GSTA12P-201ENST00000402398 508 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPS27AP11-201ENST00000402798 447 ntBASIC2.78□□□□□ -1.96
CCL20P78556 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.78□□□□□ -1.96
CCL20P78556 AL583834.1-201ENST00000406943 343 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPL26P37-201ENST00000411983 438 ntBASIC2.78□□□□□ -1.96
CCL20P78556 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.78□□□□□ -1.96
CCL20P78556 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCL20P78556 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.78□□□□□ -1.96
CCL20P78556 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC2.78□□□□□ -1.96
CCL20P78556 AL390879.2-203ENST00000426943 1121 ntBASIC2.78□□□□□ -1.96
CCL20P78556 AL360081.1-201ENST00000428299 555 ntBASIC2.78□□□□□ -1.96
CCL20P78556 USP9YP31-201ENST00000431405 881 ntBASIC2.78□□□□□ -1.96
CCL20P78556 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.78□□□□□ -1.96
CCL20P78556 ISCA1P2-201ENST00000438679 421 ntBASIC2.78□□□□□ -1.96
CCL20P78556 AC009969.1-201ENST00000438726 172 ntBASIC2.78□□□□□ -1.96
CCL20P78556 CBX1P1-201ENST00000440184 427 ntBASIC2.78□□□□□ -1.96
CCL20P78556 MTCYBP12-201ENST00000440559 1134 ntBASIC2.78□□□□□ -1.96
CCL20P78556 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.78□□□□□ -1.96
CCL20P78556 TXNP2-201ENST00000443918 295 ntBASIC2.78□□□□□ -1.96
CCL20P78556 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.78□□□□□ -1.96
CCL20P78556 PPIAP3-201ENST00000450588 505 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPL7P61-201ENST00000451721 751 ntBASIC2.78□□□□□ -1.96
CCL20P78556 Z95152.1-201ENST00000453556 656 ntBASIC2.78□□□□□ -1.96
CCL20P78556 UBDP1-202ENST00000457888 382 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPL23AP62-201ENST00000463396 453 ntBASIC2.78□□□□□ -1.96
CCL20P78556 RPL37P6-202ENST00000464216 403 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms