Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.22□□□□□ -1.73
PEX3P56589 AC090819.1-201ENST00000523800 1111 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.22□□□□□ -1.73
PEX3P56589 AL049870.4-201ENST00000555741 486 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC104229.1-201ENST00000561364 255 ntBASIC4.22□□□□□ -1.73
PEX3P56589 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 AC087499.8-201ENST00000578406 226 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.22□□□□□ -1.73
PEX3P56589 AC093227.2-201ENST00000589357 285 ntBASIC4.22□□□□□ -1.73
PEX3P56589 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 AL451086.1-201ENST00000605596 223 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC011374.2-201ENST00000607135 526 ntBASIC4.22□□□□□ -1.73
PEX3P56589 AC120053.1-201ENST00000607706 736 ntBASIC4.22□□□□□ -1.73
PEX3P56589 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PEX3P56589 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 ATE1-AS1-202ENST00000636460 506 ntBASIC4.22□□□□□ -1.73
PEX3P56589 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
PEX3P56589 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
PEX3P56589 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PEX3P56589 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
PEX3P56589 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PEX3P56589 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
PEX3P56589 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 AL603766.1-201ENST00000407763 664 ntBASIC4.21□□□□□ -1.74
PEX3P56589 RNU2-17P-201ENST00000410290 190 ntBASIC4.21□□□□□ -1.74
PEX3P56589 CYCSP19-201ENST00000411715 316 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AC009302.1-201ENST00000417147 390 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AC092647.1-201ENST00000420654 287 ntBASIC4.21□□□□□ -1.74
PEX3P56589 OR4F13P-201ENST00000428478 931 ntBASIC4.21□□□□□ -1.74
PEX3P56589 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 MTND2P2-201ENST00000434633 945 ntBASIC4.21□□□□□ -1.74
PEX3P56589 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.21□□□□□ -1.74
PEX3P56589 AC092902.1-201ENST00000486999 259 ntBASIC4.21□□□□□ -1.74
PEX3P56589 RAC1P2-201ENST00000511164 579 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AC133963.2-201ENST00000513686 578 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PEX3P56589 OSBPL9P3-201ENST00000534523 595 ntBASIC4.21□□□□□ -1.74
PEX3P56589 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.21□□□□□ -1.74
PEX3P56589 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.21□□□□□ -1.74
PEX3P56589 AC090877.1-201ENST00000561418 344 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AL109741.3-201ENST00000561748 592 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.21□□□□□ -1.74
PEX3P56589 AC005344.1-201ENST00000613391 459 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AP004607.9-201ENST00000618202 316 ntBASIC4.21□□□□□ -1.74
PEX3P56589 AL161637.1-201ENST00000622380 412 ntBASIC4.21□□□□□ -1.74
PEX3P56589 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.21□□□□□ -1.74
PEX3P56589 AC106858.1-201ENST00000637497 429 ntBASIC4.21□□□□□ -1.74
PEX3P56589 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.21□□□□□ -1.74
PEX3P56589 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PEX3P56589 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 AC006042.3-201ENST00000454684 1469 ntBASIC4.21□□□□□ -1.74
PEX3P56589 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.21□□□□□ -1.74
PEX3P56589 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 MTND5P11-201ENST00000511037 1812 ntBASIC4.21□□□□□ -1.74
PEX3P56589 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PEX3P56589 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
PEX3P56589 AC134882.1-201ENST00000603738 1676 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AP004289.2-201ENST00000444413 1457 ntBASIC4.2□□□□□ -1.74
PEX3P56589 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PEX3P56589 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PEX3P56589 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 HMGB1P10-201ENST00000395823 563 ntBASIC4.2□□□□□ -1.74
PEX3P56589 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 RN7SKP202-201ENST00000410439 330 ntBASIC4.2□□□□□ -1.74
PEX3P56589 RN7SKP159-201ENST00000410657 292 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PEX3P56589 RPL36AP36-201ENST00000418616 301 ntBASIC4.2□□□□□ -1.74
PEX3P56589 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 DPY19L1P2-201ENST00000426647 915 ntBASIC4.2□□□□□ -1.74
PEX3P56589 NPM1P34-201ENST00000428821 893 ntBASIC4.2□□□□□ -1.74
PEX3P56589 SNORA71B-202ENST00000439232 272 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AC122718.1-201ENST00000439448 744 ntBASIC4.2□□□□□ -1.74
PEX3P56589 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.2□□□□□ -1.74
PEX3P56589 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 HMGB1P26-201ENST00000452520 628 ntBASIC4.2□□□□□ -1.74
PEX3P56589 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.2□□□□□ -1.74
PEX3P56589 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.2□□□□□ -1.74
PEX3P56589 FAM133DP-201ENST00000464802 691 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms