Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRCA2P51587 DEFB109A-201ENST00000482450 265 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.58□□□□□ -1.84
BRCA2P51587 AP002404.1-201ENST00000532005 451 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 DUXAP6-201ENST00000553858 601 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.58□□□□□ -1.84
BRCA2P51587 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRCA2P51587 AL078595.2-201ENST00000605309 1780 ntBASIC3.58□□□□□ -1.84
BRCA2P51587 BCORP1-203ENST00000513194 5093 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 LINC01355-201ENST00000566551 5444 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.57□□□□□ -1.84
BRCA2P51587 AC005008.1-201ENST00000456151 612 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 NPM1P17-201ENST00000479221 602 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 RN7SL371P-201ENST00000578099 267 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 SNORD91B-202ENST00000608459 222 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 OR6R2P-201ENST00000609216 300 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 BNIP3P41-202ENST00000616656 861 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 ZNF90P1-201ENST00000480493 1951 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRCA2P51587 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
BRCA2P51587 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.57□□□□□ -1.84
BRCA2P51587 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
BRCA2P51587 AC003985.2-201ENST00000562268 1669 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRCA2P51587 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 SNORD67-201ENST00000390833 111 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 HIGD1AP12-201ENST00000427832 281 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 AC008413.1-201ENST00000511864 177 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRCA2P51587 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.57□□□□□ -1.84
BRCA2P51587 MTND4P22-201ENST00000413116 1169 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.57□□□□□ -1.84
BRCA2P51587 snoU13.15-201ENST00000459407 104 ntBASIC3.57□□□□□ -1.84
BRCA2P51587 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRCA2P51587 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRCA2P51587 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.56□□□□□ -1.84
BRCA2P51587 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
BRCA2P51587 RN7SKP209-201ENST00000516888 304 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.56□□□□□ -1.84
BRCA2P51587 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.56□□□□□ -1.84
BRCA2P51587 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
BRCA2P51587 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
BRCA2P51587 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
BRCA2P51587 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 RPL21P40-201ENST00000428586 483 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 AC133134.1-201ENST00000466800 359 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 AC087312.1-201ENST00000471411 480 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.56□□□□□ -1.84
BRCA2P51587 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.56□□□□□ -1.84
BRCA2P51587 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.56□□□□□ -1.84
BRCA2P51587 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
BRCA2P51587 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.56□□□□□ -1.84
BRCA2P51587 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.56□□□□□ -1.84
BRCA2P51587 AC109329.2-201ENST00000519658 482 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRCA2P51587 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.56□□□□□ -1.84
BRCA2P51587 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.56□□□□□ -1.84
BRCA2P51587 AL162713.1-201ENST00000604480 262 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 AL732372.2-225ENST00000642124 456 ntBASIC3.56□□□□□ -1.84
BRCA2P51587 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
BRCA2P51587 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
BRCA2P51587 AC027287.1-201ENST00000553115 1453 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.55□□□□□ -1.84
BRCA2P51587 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 AC034159.1-201ENST00000513885 583 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 UBTFL9-201ENST00000534504 1148 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 ELOCP29-201ENST00000588193 334 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 AL359535.1-201ENST00000612100 1087 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRCA2P51587 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
BRCA2P51587 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRCA2P51587 NMD3P1-201ENST00000439704 1488 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
BRCA2P51587 SEPT7P2-202ENST00000398921 823 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.55□□□□□ -1.84
BRCA2P51587 HSPE1P6-201ENST00000479457 291 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 ANXA2P1-201ENST00000505539 926 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 MIR7154-201ENST00000620673 73 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 AL512643.1-201ENST00000635735 524 ntBASIC3.55□□□□□ -1.84
BRCA2P51587 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.55□□□□□ -1.84
BRCA2P51587 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
BRCA2P51587 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.55□□□□□ -1.84
BRCA2P51587 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.54□□□□□ -1.84
BRCA2P51587 AC128716.1-201ENST00000475129 166 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms