Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC3.6□□□□□ -1.83
HTTP42858 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.6□□□□□ -1.83
HTTP42858 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.6□□□□□ -1.83
HTTP42858 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.6□□□□□ -1.83
HTTP42858 AC243829.7-201ENST00000633081 225 ntBASIC3.6□□□□□ -1.83
HTTP42858 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HTTP42858 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HTTP42858 GSTM3P2-201ENST00000412746 530 ntBASIC3.59□□□□□ -1.83
HTTP42858 NPM1P11-201ENST00000417106 855 ntBASIC3.59□□□□□ -1.83
HTTP42858 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.59□□□□□ -1.83
HTTP42858 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.59□□□□□ -1.83
HTTP42858 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.59□□□□□ -1.83
HTTP42858 AL732372.2-225ENST00000642124 456 ntBASIC3.59□□□□□ -1.83
HTTP42858 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HTTP42858 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HTTP42858 AP000432.2-201ENST00000624164 2048 ntBASIC3.59□□□□□ -1.83
HTTP42858 TPT1P1-201ENST00000458495 518 ntBASIC3.59□□□□□ -1.83
HTTP42858 uc_338.25-201ENST00000613756 156 ntBASIC3.59□□□□□ -1.83
HTTP42858 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HTTP42858 RIOK3P1-201ENST00000418778 1528 ntBASIC3.59□□□□□ -1.83
HTTP42858 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HTTP42858 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
HTTP42858 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.59□□□□□ -1.84
HTTP42858 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.59□□□□□ -1.84
HTTP42858 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.59□□□□□ -1.84
HTTP42858 AL157817.1-201ENST00000614264 790 ntBASIC3.59□□□□□ -1.84
HTTP42858 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HTTP42858 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
HTTP42858 AC007390.2-201ENST00000606229 3803 ntBASIC3.58□□□□□ -1.84
HTTP42858 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HTTP42858 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 RPS24P12-201ENST00000402084 394 ntBASIC3.58□□□□□ -1.84
HTTP42858 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.58□□□□□ -1.84
HTTP42858 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.58□□□□□ -1.84
HTTP42858 RPS3P1-201ENST00000456781 192 ntBASIC3.58□□□□□ -1.84
HTTP42858 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HTTP42858 OR4C2P-201ENST00000530855 1064 ntBASIC3.58□□□□□ -1.84
HTTP42858 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.58□□□□□ -1.84
HTTP42858 HMGB1P6-201ENST00000569046 646 ntBASIC3.58□□□□□ -1.84
HTTP42858 MRPS35P3-201ENST00000603189 709 ntBASIC3.58□□□□□ -1.84
HTTP42858 AL035425.3-201ENST00000564206 4996 ntBASIC3.58□□□□□ -1.84
HTTP42858 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 SNORD67-201ENST00000390833 111 ntBASIC3.58□□□□□ -1.84
HTTP42858 AC019097.1-201ENST00000424783 735 ntBASIC3.58□□□□□ -1.84
HTTP42858 AC005189.1-201ENST00000431286 310 ntBASIC3.58□□□□□ -1.84
HTTP42858 SETP12-201ENST00000514068 805 ntBASIC3.58□□□□□ -1.84
HTTP42858 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.58□□□□□ -1.84
HTTP42858 AC241585.2-209ENST00000638217 143 ntBASIC3.58□□□□□ -1.84
HTTP42858 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HTTP42858 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
HTTP42858 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HTTP42858 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HTTP42858 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
HTTP42858 AL513302.2-201ENST00000562313 1842 ntBASIC3.57□□□□□ -1.84
HTTP42858 AC132942.1-201ENST00000486753 483 ntBASIC3.57□□□□□ -1.84
HTTP42858 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.57□□□□□ -1.84
HTTP42858 SCARNA20.6-201ENST00000517251 106 ntBASIC3.57□□□□□ -1.84
HTTP42858 AP000926.4-201ENST00000527351 454 ntBASIC3.57□□□□□ -1.84
HTTP42858 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.57□□□□□ -1.84
HTTP42858 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
HTTP42858 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.57□□□□□ -1.84
HTTP42858 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.57□□□□□ -1.84
HTTP42858 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.57□□□□□ -1.84
HTTP42858 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.57□□□□□ -1.84
HTTP42858 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HTTP42858 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.57□□□□□ -1.84
HTTP42858 MAPK10-286ENST00000641208 8747 ntBASIC3.57□□□□□ -1.84
HTTP42858 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HTTP42858 HDGFP1-201ENST00000405943 252 ntBASIC3.57□□□□□ -1.84
HTTP42858 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.57□□□□□ -1.84
HTTP42858 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.57□□□□□ -1.84
HTTP42858 MIR3936-201ENST00000584304 110 ntBASIC3.57□□□□□ -1.84
HTTP42858 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.57□□□□□ -1.84
HTTP42858 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
HTTP42858 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HTTP42858 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC3.56□□□□□ -1.84
HTTP42858 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.56□□□□□ -1.84
HTTP42858 TRBV12-1-201ENST00000479785 344 ntBASIC3.56□□□□□ -1.84
HTTP42858 AC010306.1-201ENST00000523223 1117 ntBASIC3.56□□□□□ -1.84
HTTP42858 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.56□□□□□ -1.84
HTTP42858 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 AP004607.9-201ENST00000618202 316 ntBASIC3.56□□□□□ -1.84
HTTP42858 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
HTTP42858 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms