Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AP000873.1-201ENST00000463987 400 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RPL37P6-202ENST00000464216 403 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 IGBP1P5-201ENST00000507524 1000 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC008565.1-201ENST00000509046 885 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC008885.2-201ENST00000509506 930 ntBASIC3.69□□□□□ -1.82
NCK1P16333 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
NCK1P16333 RNU4-60P-201ENST00000517239 135 ntBASIC3.69□□□□□ -1.82
NCK1P16333 CDH12P4-201ENST00000517835 295 ntBASIC3.69□□□□□ -1.82
NCK1P16333 CDH12P3-201ENST00000517935 295 ntBASIC3.69□□□□□ -1.82
NCK1P16333 CDH12P1-201ENST00000518435 295 ntBASIC3.69□□□□□ -1.82
NCK1P16333 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.69□□□□□ -1.82
NCK1P16333 AC090877.1-201ENST00000561418 344 ntBASIC3.69□□□□□ -1.82
NCK1P16333 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.69□□□□□ -1.82
NCK1P16333 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 AC025946.2-201ENST00000603398 234 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AL049539.1-201ENST00000611964 459 ntBASIC3.69□□□□□ -1.82
NCK1P16333 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.69□□□□□ -1.82
NCK1P16333 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.69□□□□□ -1.82
NCK1P16333 MIR4496-201ENST00000635896 61 ntBASIC3.69□□□□□ -1.82
NCK1P16333 HSPA8P1-201ENST00000425843 1833 ntBASIC3.69□□□□□ -1.82
NCK1P16333 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
NCK1P16333 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NCK1P16333 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.69□□□□□ -1.82
NCK1P16333 AC104446.1-201ENST00000613728 1321 ntBASIC3.69□□□□□ -1.82
NCK1P16333 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
NCK1P16333 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.68□□□□□ -1.82
NCK1P16333 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 AC106871.1-201ENST00000568324 3102 ntBASIC3.68□□□□□ -1.82
NCK1P16333 MIR423-201ENST00000362201 94 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RNA5SP443-201ENST00000363083 132 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RN7SKP103-201ENST00000363848 320 ntBASIC3.68□□□□□ -1.82
NCK1P16333 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NCK1P16333 RNU11-4P-201ENST00000391149 133 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.68□□□□□ -1.82
NCK1P16333 AC011933.1-201ENST00000413334 321 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC004987.3-201ENST00000413879 771 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RPL21P109-201ENST00000422213 475 ntBASIC3.68□□□□□ -1.82
NCK1P16333 BTF3P10-201ENST00000433415 495 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.68□□□□□ -1.82
NCK1P16333 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.68□□□□□ -1.82
NCK1P16333 AC083863.1-201ENST00000438811 231 ntBASIC3.68□□□□□ -1.82
NCK1P16333 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.68□□□□□ -1.82
NCK1P16333 MTCO3P16-201ENST00000454456 754 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC116533.1-201ENST00000459748 321 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RPL38P1-201ENST00000460914 211 ntBASIC3.68□□□□□ -1.82
NCK1P16333 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.68□□□□□ -1.82
NCK1P16333 AC013356.1-201ENST00000489027 564 ntBASIC3.68□□□□□ -1.82
NCK1P16333 RN7SL604P-201ENST00000492589 296 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC092045.1-201ENST00000495716 1231 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.68□□□□□ -1.82
NCK1P16333 IGHV3-32-201ENST00000519182 355 ntBASIC3.68□□□□□ -1.82
NCK1P16333 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.68□□□□□ -1.82
NCK1P16333 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.68□□□□□ -1.82
NCK1P16333 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.68□□□□□ -1.82
NCK1P16333 MIR4715-201ENST00000584117 79 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.68□□□□□ -1.82
NCK1P16333 AC104785.1-201ENST00000603220 588 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.68□□□□□ -1.82
NCK1P16333 AC112503.1-201ENST00000608436 391 ntBASIC3.68□□□□□ -1.82
NCK1P16333 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AC018926.3-201ENST00000618841 406 ntBASIC3.68□□□□□ -1.82
NCK1P16333 AL353746.1-201ENST00000566293 6881 ntBASIC3.68□□□□□ -1.82
NCK1P16333 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NCK1P16333 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.68□□□□□ -1.82
NCK1P16333 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.67□□□□□ -1.82
NCK1P16333 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
NCK1P16333 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NCK1P16333 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NCK1P16333 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.67□□□□□ -1.82
NCK1P16333 RNVU1-6-201ENST00000364688 164 ntBASIC3.67□□□□□ -1.82
NCK1P16333 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.67□□□□□ -1.82
NCK1P16333 RPS3AP23-201ENST00000401762 784 ntBASIC3.67□□□□□ -1.82
NCK1P16333 PRRC2CP1-201ENST00000404428 159 ntBASIC3.67□□□□□ -1.82
NCK1P16333 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NCK1P16333 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.67□□□□□ -1.82
NCK1P16333 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
NCK1P16333 SKP1P1-201ENST00000438081 489 ntBASIC3.67□□□□□ -1.82
NCK1P16333 AC006466.1-201ENST00000438721 289 ntBASIC3.67□□□□□ -1.82
NCK1P16333 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.67□□□□□ -1.82
NCK1P16333 CBX1P1-201ENST00000440184 427 ntBASIC3.67□□□□□ -1.82
NCK1P16333 BTBD7P2-201ENST00000441962 620 ntBASIC3.67□□□□□ -1.82
NCK1P16333 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
NCK1P16333 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.67□□□□□ -1.82
NCK1P16333 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
NCK1P16333 DNAJC19P1-201ENST00000455312 319 ntBASIC3.67□□□□□ -1.82
NCK1P16333 AC008280.2-201ENST00000455473 307 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms