Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 RPL6P21-201ENST00000418672 846 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC092184.1-201ENST00000625042 715 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC104623.2-202ENST00000623477 4002 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 RNA5SP458-201ENST00000516188 119 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC124856.1-201ENST00000600819 896 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC006539.2-201ENST00000601729 572 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 AC093535.2-201ENST00000624769 2326 ntBASIC3.32□□□□□ -1.88
CHD8Q9HCK8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CHD8Q9HCK8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AC010374.2-201ENST00000512933 535 ntBASIC3.31□□□□□ -1.88
CHD8Q9HCK8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AL590808.1-201ENST00000618696 141 ntBASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AC022031.1-201ENST00000585985 2593 ntBASIC3.31□□□□□ -1.88
CHD8Q9HCK8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 RPS29P21-201ENST00000496272 170 ntBASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.31□□□□□ -1.88
CHD8Q9HCK8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 RPS26P4-201ENST00000431743 355 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AL135938.1-201ENST00000443141 297 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AP002404.1-201ENST00000532005 451 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 RPL23AP36-201ENST00000413895 458 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC079809.1-201ENST00000415468 276 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 RN7SL863P-201ENST00000462370 296 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 RPL23AP65-201ENST00000475608 468 ntBASIC3.3□□□□□ -1.88
CHD8Q9HCK8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHD8Q9HCK8 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHD8Q9HCK8 FRG1CP-201ENST00000358464 769 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 Y_RNA.338-201ENST00000365320 114 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 AL662791.1-201ENST00000441992 928 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD8Q9HCK8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD8Q9HCK8 AC008885.1-201ENST00000514930 301 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 AC022968.1-201ENST00000567372 442 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 AC104446.1-201ENST00000613728 1321 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 FAM35DP-201ENST00000323387 2712 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.29□□□□□ -1.88
CHD8Q9HCK8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD8Q9HCK8 MIR184-201ENST00000384962 84 ntBASIC3.29□□□□□ -1.88
CHD8Q9HCK8 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms