Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL020997.3-201ENST00000602843 359 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL445435.1-201ENST00000604232 665 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL109618.2-201ENST00000605527 211 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AL022401.1-201ENST00000619498 108 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 MAPK10-286ENST00000641208 8747 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 AC099786.3-201ENST00000565735 1410 ntBASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
POLR1BQ9H9Y6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RNU4-68P-201ENST00000364314 141 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RPS3AP37-201ENST00000419176 745 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RAC1P8-201ENST00000427086 527 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 MTCO1P3-201ENST00000429327 192 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RPL23AP15-201ENST00000450202 459 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RPS17P2-201ENST00000461663 408 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RN7SL517P-201ENST00000462240 305 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 VPS26AP1-201ENST00000483197 979 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC048346.1-201ENST00000510247 144 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC026402.1-201ENST00000513642 170 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RN7SKP82-201ENST00000516786 223 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AP001207.1-201ENST00000524051 481 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC092747.2-201ENST00000545069 983 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC007224.1-201ENST00000564410 144 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC022069.1-201ENST00000582910 658 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC073091.2-201ENST00000603205 907 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC021749.1-201ENST00000604322 607 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AP005019.3-201ENST00000620418 560 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AP001002.2-201ENST00000625137 386 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC090897.3-201ENST00000636973 1157 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AC022893.2-201ENST00000564832 3296 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 AL592437.2-201ENST00000421655 2434 ntBASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
POLR1BQ9H9Y6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
POLR1BQ9H9Y6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 EOGT-210ENST00000615922 1931 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 RNU6-839P-201ENST00000363347 108 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 RNA5SP515-201ENST00000364570 118 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 SNORA71.2-201ENST00000364941 134 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 RNU6-906P-201ENST00000384700 70 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 OR6C69P-201ENST00000394268 893 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AL121834.1-202ENST00000404494 277 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 U3.35-201ENST00000408405 208 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AL591848.1-201ENST00000413092 322 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AC140479.3-201ENST00000418944 1126 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AL513175.2-201ENST00000422071 443 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AC233981.1-201ENST00000423224 461 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 HIGD1AP12-201ENST00000427832 281 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 RPS27AP12-201ENST00000429552 465 ntBASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.52□□□□□ -1.69
POLR1BQ9H9Y6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms