Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RPL30P9-201ENST00000465586 330 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 FTH1P2-201ENST00000466086 412 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RPL21P6-201ENST00000479171 504 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC090013.1-201ENST00000485147 480 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SNX5P1-201ENST00000505757 1041 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP228-201ENST00000516232 133 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-405P-201ENST00000516637 110 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SNORA48.10-201ENST00000516965 160 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AF279873.1-201ENST00000523393 313 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OR6C7P-201ENST00000547875 934 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC137768.1-201ENST00000549998 553 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 CR383656.6-201ENST00000550518 394 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 MTND1P15-201ENST00000579262 949 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 FKBP1AP1-201ENST00000594588 318 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC069304.2-201ENST00000605154 435 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AL049539.1-201ENST00000611964 459 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC068137.3-201ENST00000639191 341 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC073869.6-201ENST00000640656 341 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC005832.2-201ENST00000538921 1430 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC022031.1-201ENST00000585985 2593 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 MTCO1P23-201ENST00000415223 1526 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 CR383658.2-201ENST00000547576 1525 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP90-201ENST00000364801 99 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 MIR550A3-201ENST00000390735 95 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP339-201ENST00000390987 122 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 RPL23AP29-201ENST00000397284 453 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC013429.2-201ENST00000418798 781 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL139148.1-201ENST00000427122 680 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL031584.1-201ENST00000447169 754 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL592447.1-201ENST00000447592 540 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 EPS15P1-201ENST00000448836 336 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 NDUFA5P7-201ENST00000452914 242 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 SSXP1-201ENST00000453640 473 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC005229.2-201ENST00000456995 399 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC004453.1-201ENST00000487895 408 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC073073.1-201ENST00000493920 463 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC097173.1-201ENST00000505862 819 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC109927.2-201ENST00000506416 303 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 ARL2BPP4-201ENST00000506854 471 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC027309.2-201ENST00000520566 192 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 HMGB1P40-201ENST00000525121 540 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC239860.2-201ENST00000525886 270 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 SLC2A13P1-201ENST00000531560 322 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC126177.5-201ENST00000549599 178 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL049779.2-201ENST00000553847 315 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 PCMTD1P2-201ENST00000565017 355 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 MIR4801-201ENST00000582704 82 ntBASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.78□□□□□ -1.64
AMBRA1Q9C0C7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms