Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AL133477.1-201ENST00000457472 514 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 MIR3162-201ENST00000581818 82 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AL390816.3-201ENST00000604527 1066 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 MIR7702-201ENST00000621931 59 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 HSPE1P27-201ENST00000430808 296 ntBASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
ALMS1Q8TCU4 RNU1-70P-201ENST00000362618 164 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 AC096644.3-201ENST00000416788 338 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 PTP4A1P3-201ENST00000433661 420 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 AC023141.12-201ENST00000512399 199 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 AL031595.2-201ENST00000624215 19071 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 AC119744.1-201ENST00000454746 1715 ntBASIC2.4□□□□□ -2.02
ALMS1Q8TCU4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 LAP3P1-201ENST00000403648 294 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 RPS4XP2-201ENST00000458402 793 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 RPL7P48-201ENST00000461513 746 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 RNU6-579P-201ENST00000516879 102 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC113192.3-201ENST00000529152 742 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AL121594.4-201ENST00000556211 1196 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 BNIP3P10-201ENST00000605360 577 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AL713922.2-201ENST00000619384 716 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC233309.1-201ENST00000619522 751 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AF117829.1-206ENST00000621883 3802 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AL732618.1-201ENST00000623251 301 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ALMS1Q8TCU4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL353705.1-201ENST00000433468 480 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC097262.1-201ENST00000452559 548 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 U3.39-201ENST00000408569 239 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL024507.1-201ENST00000412741 274 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 YWHAQP9-201ENST00000445891 512 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 UBA52P3-201ENST00000491303 382 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC006445.1-201ENST00000491925 405 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC091826.1-201ENST00000514065 313 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AC141257.3-201ENST00000572906 215 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL390838.2-201ENST00000602394 274 ntBASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.39□□□□□ -2.03
ALMS1Q8TCU4 AL645937.1-201ENST00000641739 1652 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms