Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 OR52B3P-201ENST00000314715 928 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RNA5SP273-201ENST00000362484 113 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AL024474.1-201ENST00000404655 591 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 MIR1178-201ENST00000408396 91 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RNU2-50P-201ENST00000410494 143 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RNU2-8P-201ENST00000410727 190 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC069218.2-201ENST00000411665 344 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC12P31275 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC12P31275 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC133104.1-201ENST00000429100 218 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC114755.5-201ENST00000447760 831 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC132479.1-201ENST00000449160 144 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RPS20P32-201ENST00000456044 356 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC087312.1-201ENST00000471411 480 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC114728.1-201ENST00000488289 483 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RPL35P6-201ENST00000490024 372 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 AL136038.1-201ENST00000497246 351 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC114967.1-201ENST00000504890 259 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 Y_RNA.667-201ENST00000516212 107 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 Y_RNA.693-201ENST00000516641 110 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RNU6-201P-201ENST00000517100 61 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC12P31275 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC022616.6-201ENST00000520479 119 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 OR7E18P-201ENST00000592589 702 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC068768.2-201ENST00000602352 343 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC011468.4-201ENST00000603942 409 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 AL591167.1-201ENST00000607321 456 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 AL137067.2-201ENST00000621202 131 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 AC139792.3-201ENST00000623525 224 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 CYP3A51P-201ENST00000633513 256 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 HSPD1P8-201ENST00000400121 1658 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 AC024587.1-201ENST00000505925 2157 ntBASIC5.36□□□□□ -1.55
HOXC12P31275 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXC12P31275 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HOXC12P31275 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HOXC12P31275 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ERCC6-202ENST00000374127 1782 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 BCORP1-203ENST00000513194 5093 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC017104.4-201ENST00000636283 1592 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXC12P31275 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 OR10R3P-201ENST00000361688 942 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RNA5SP375-201ENST00000362975 119 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RNU6-181P-201ENST00000363225 107 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RN7SKP224-201ENST00000364140 325 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RNU6-877P-201ENST00000383868 107 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 SNORA70H-201ENST00000383910 135 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 SNORA70J-201ENST00000384182 135 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 MIR143-201ENST00000385300 106 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 RN7SKP293-201ENST00000411389 296 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 HMGA1P8-201ENST00000414130 321 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 COX6CP15-201ENST00000426313 211 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC104850.1-201ENST00000435940 476 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC098614.3-201ENST00000438957 440 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms