Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CNGA1P29973 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.71□□□□□ -1.49
CNGA1P29973 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CNGA1P29973 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.71□□□□□ -1.49
CNGA1P29973 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.71□□□□□ -1.49
CNGA1P29973 AC087359.1-201ENST00000508335 1740 ntBASIC5.71□□□□□ -1.49
CNGA1P29973 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
CNGA1P29973 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 AC006210.2-201ENST00000367074 1545 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CNGA1P29973 RNU6-441P-201ENST00000384545 106 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 ATP5F1P4-201ENST00000397288 746 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 MIR1284-201ENST00000408337 120 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.71□□□□□ -1.5
CNGA1P29973 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 SDCBPP2-201ENST00000424643 885 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 RPL18P10-201ENST00000425606 538 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.71□□□□□ -1.5
CNGA1P29973 AL158073.1-201ENST00000426848 1104 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 RPL36P19-201ENST00000430744 301 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 MTND4P32-201ENST00000437189 1237 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.71□□□□□ -1.5
CNGA1P29973 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.71□□□□□ -1.5
CNGA1P29973 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CNGA1P29973 AL354714.3-201ENST00000447284 493 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC108463.1-201ENST00000450258 347 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 IGHV5-78-201ENST00000450948 295 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 MTND3P7-201ENST00000474435 343 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 RPL30P6-201ENST00000475925 342 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
CNGA1P29973 ATP1B1P1-201ENST00000509767 915 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 XKRY-201ENST00000510392 1100 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 HMGB3P13-201ENST00000511263 607 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 RN7SKP92-201ENST00000517266 244 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.71□□□□□ -1.5
CNGA1P29973 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.71□□□□□ -1.5
CNGA1P29973 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.71□□□□□ -1.5
CNGA1P29973 AC074029.1-201ENST00000552531 1044 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.71□□□□□ -1.5
CNGA1P29973 AL389895.1-201ENST00000554127 252 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 SNORD39.3-201ENST00000584451 71 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC107982.3-201ENST00000584957 985 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 DUXAP11-201ENST00000603858 526 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AL163642.2-201ENST00000604722 1019 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC010738.1-201ENST00000604970 987 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AP001521.1-201ENST00000609150 300 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC009090.3-201ENST00000616553 565 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 AC091932.2-201ENST00000623014 291 ntBASIC5.71□□□□□ -1.5
CNGA1P29973 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.71□□□□□ -1.5
CNGA1P29973 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.71□□□□□ -1.5
CNGA1P29973 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNGA1P29973 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.7□□□□□ -1.5
CNGA1P29973 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNGA1P29973 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CNGA1P29973 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNGA1P29973 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 AL445523.1-201ENST00000451184 1362 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNGA1P29973 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.7□□□□□ -1.5
CNGA1P29973 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 SNORA70.2-201ENST00000364506 135 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 RNU6-657P-201ENST00000383904 107 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 PIGPP2-201ENST00000411569 458 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 CTSL3P-202ENST00000412179 788 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.7□□□□□ -1.5
CNGA1P29973 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.7□□□□□ -1.5
CNGA1P29973 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 ARL4AP3-201ENST00000441452 574 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.7□□□□□ -1.5
CNGA1P29973 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.7□□□□□ -1.5
CNGA1P29973 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 DDX39BP2-208ENST00000453923 258 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 AC111000.3-201ENST00000508057 576 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 AC098976.1-201ENST00000513014 541 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.7□□□□□ -1.5
CNGA1P29973 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNGA1P29973 AC009643.1-201ENST00000532030 391 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.7□□□□□ -1.5
CNGA1P29973 AP001880.2-201ENST00000538233 448 ntBASIC5.7□□□□□ -1.5
CNGA1P29973 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.7□□□□□ -1.5
CNGA1P29973 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms