Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDHGC4Q9Y5F7 AC022034.1-201ENST00000512867 2156 ntBASIC6.3□□□□□ -1.4
PCDHGC4Q9Y5F7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGC4Q9Y5F7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDHGC4Q9Y5F7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 TAB3P1-202ENST00000452645 1634 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-853P-201ENST00000364306 107 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-744P-201ENST00000365557 107 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL451142.1-201ENST00000375867 775 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-1316P-201ENST00000384242 108 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 SNORD3H-201ENST00000384486 214 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 MIR548K-201ENST00000408406 116 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 HMGB3P2-201ENST00000411913 584 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC074085.1-201ENST00000413598 418 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RPS15AP12-201ENST00000419498 388 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL138799.3-201ENST00000438968 350 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 TXNP1-201ENST00000441872 371 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC004980.3-201ENST00000447046 365 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AP001025.2-201ENST00000490908 477 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC034222.1-201ENST00000494052 532 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC110373.1-201ENST00000505994 3505 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC091885.1-201ENST00000506658 268 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC004062.1-201ENST00000509926 645 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC098591.2-201ENST00000510152 315 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RNU6-864P-201ENST00000516256 108 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 RNA5SP400-201ENST00000517155 111 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC107958.1-201ENST00000556576 290 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC022884.3-201ENST00000579571 248 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AL390240.1-201ENST00000612950 384 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC015712.7-201ENST00000615211 635 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
PCDHGC4Q9Y5F7 AC011493.1-201ENST00000596753 1632 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AL512646.1-201ENST00000269395 1077 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 RNY4P16-201ENST00000364768 94 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 MRPL42P3-201ENST00000401492 326 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL31P52-201ENST00000407532 367 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 RN7SKP144-201ENST00000411108 279 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 RNA5SP115-201ENST00000411160 107 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 RPL37P10-201ENST00000412884 288 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 PRELID3BP11-201ENST00000414230 479 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 METTL15P3-201ENST00000415522 1221 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AL354707.3-201ENST00000427308 331 ntBASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDHGC4Q9Y5F7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms