Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 RN7SKP141-201ENST00000516167 338 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 RNA5SP373-201ENST00000517271 95 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 SMARCE1P4-201ENST00000523647 241 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 HMGB1P40-201ENST00000525121 540 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 PMS2P3-207ENST00000529061 717 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 OR5D15P-201ENST00000531671 942 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 CYP2C60P-201ENST00000566088 139 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC133552.5-201ENST00000604266 540 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AL359697.1-201ENST00000624879 587 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC116618.1-201ENST00000634617 774 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 OR5H6-203ENST00000642105 978 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC079097.1-201ENST00000512187 1399 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC005539.1-201ENST00000443768 1479 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ZNF733P-202ENST00000444809 1573 ntBASIC5.5□□□□□ -1.53
CD248Q9HCU0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CD248Q9HCU0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AL137141.1-201ENST00000624622 4836 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RNA5SP305-201ENST00000362665 119 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 RNU1-43P-201ENST00000365052 165 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 MIR585-201ENST00000384887 94 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 MIR550A3-201ENST00000390735 95 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 ARL4AP5-201ENST00000404372 599 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 U3.36-201ENST00000408418 213 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RPL12P9-201ENST00000412942 488 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RPS15AP38-201ENST00000413110 372 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RPS26P13-201ENST00000419030 330 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 PAICSP7-201ENST00000419829 962 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC093655.2-201ENST00000425735 631 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 FAM96AP1-201ENST00000430879 482 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AL672138.1-201ENST00000450604 1015 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 SSXP1-201ENST00000453640 473 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC147055.4-201ENST00000504399 745 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RNU6-507P-201ENST00000516045 100 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 DEFB108A-201ENST00000530110 222 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC027369.5-201ENST00000533838 755 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC009063.1-201ENST00000563342 702 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC009704.2-201ENST00000618739 483 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 AC022106.2-201ENST00000620114 757 ntBASIC5.49□□□□□ -1.53
CD248Q9HCU0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CD248Q9HCU0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CD248Q9HCU0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CD248Q9HCU0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CD248Q9HCU0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms