Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MPI-202ENST00000352410 5828 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 DAB1-206ENST00000414851 5168 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 Y_RNA.242-201ENST00000364473 110 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNA5SP488-201ENST00000364942 116 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 URM1-201ENST00000372847 753 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNU6-1189P-201ENST00000383958 107 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNVU1-1-201ENST00000384610 164 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 FXYD5-204ENST00000392219 872 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AL929472.1-201ENST00000417484 429 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AL591419.1-201ENST00000427423 339 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 Z93930.1-201ENST00000447099 245 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AC107421.1-201ENST00000477300 404 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNU6-917P-201ENST00000516294 104 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNU6-448P-201ENST00000517052 107 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 HSPE1P18-201ENST00000517602 280 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR4778-201ENST00000577635 80 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR4269-201ENST00000578705 84 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR4283-2-201ENST00000578980 80 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MIR4283-1-201ENST00000582960 80 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AL513534.2-201ENST00000603836 250 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 uc_338.30-201ENST00000612038 168 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 PFN1P2-202ENST00000621347 397 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KRTAP9-1-204ENST00000635603 369 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AL672167.1-203ENST00000641299 2975 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC01940-201ENST00000455228 3489 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 GHR-212ENST00000620156 4529 ntTSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 COL6A4P1-201ENST00000446690 2336 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AC011453.1-201ENST00000597619 2239 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KCNA2-203ENST00000485317 2496 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 PKD1L2-203ENST00000525539 7379 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 AL355834.1-201ENST00000556602 3965 ntBASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 GOLGA6L22-203ENST00000620691 3991 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 RNF14-205ENST00000394520 4235 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRTAP3-3Q9BYR6 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 UGT1A1-202ENST00000360418 3389 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 FKBP4P7-201ENST00000433874 1363 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 KRTAP16-1-201ENST00000391352 1554 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 TLR1-202ENST00000502213 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LPAL2-203ENST00000454031 2498 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RNU1-34P-201ENST00000364421 157 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RNA5SP515-201ENST00000364570 118 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 UBBP2-201ENST00000376781 231 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RN7SKP229-201ENST00000410465 302 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 FGF1-208ENST00000419524 683 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 NME1P1-201ENST00000420914 382 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 GRPEL2P2-201ENST00000421856 670 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RPL31P63-201ENST00000422565 375 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 RPL27AP8-201ENST00000424277 446 ntBASIC4.79□□□□□ -1.64
KRTAP3-3Q9BYR6 AL035398.1-201ENST00000430869 322 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms