Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 UBE2FP2-201ENST00000566646 462 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 MIR544B-201ENST00000582372 78 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 MIR4307-201ENST00000582802 84 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 H3F3BP2-201ENST00000583907 357 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 VN1R79P-201ENST00000593540 513 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC112191.3-201ENST00000604371 277 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AL161729.4-201ENST00000604650 476 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC090578.1-201ENST00000604955 591 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AP000860.1-201ENST00000605250 559 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC004067.1-201ENST00000608733 700 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC091304.9-201ENST00000612091 226 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC008250.2-201ENST00000615261 205 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 uc_338.7-201ENST00000621834 124 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC006378.2-201ENST00000623178 2476 ntBASIC5.24□□□□□ -1.57
HIPK4Q8NE63 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HIPK4Q8NE63 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 RNU6-984P-201ENST00000363236 109 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 Y_RNA.256-201ENST00000364594 104 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 SNORD115-47-201ENST00000391226 86 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 COX5BP7-201ENST00000414780 274 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC245052.5-201ENST00000416320 649 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 MTCO2P19-201ENST00000427513 598 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LSM1P1-201ENST00000438629 273 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 ELOCP10-201ENST00000440624 327 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 CNOT7P2-201ENST00000441051 832 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC073909.1-201ENST00000447112 999 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 HMGN3P1-201ENST00000453847 193 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC146507.1-201ENST00000468335 354 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 RN7SL741P-201ENST00000482473 289 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 NDUFB4P2-201ENST00000509515 391 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC026412.2-201ENST00000512270 1075 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC108064.1-201ENST00000513791 460 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 OR5M2P-201ENST00000529003 936 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC022878.1-201ENST00000530684 149 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC118273.2-201ENST00000532092 465 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC027369.5-201ENST00000533838 755 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.23□□□□□ -1.57
HIPK4Q8NE63 DPPA2P4-201ENST00000563717 878 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 EIF5A2P1-201ENST00000564027 460 ntBASIC5.23□□□□□ -1.57
HIPK4Q8NE63 BGLT3-201ENST00000564523 994 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms