Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5□□□□□ -1.61
SIMC1Q8NDZ2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SIMC1Q8NDZ2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SIMC1Q8NDZ2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SIMC1Q8NDZ2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5□□□□□ -1.61
SIMC1Q8NDZ2 AL034549.2-201ENST00000618285 3373 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 CR848007.1-201ENST00000442354 1699 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC004817.4-201ENST00000602396 3625 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RNU6-931P-201ENST00000363850 107 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 OR1L1-202ENST00000373686 1083 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC016831.2-201ENST00000417179 352 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AL022400.1-201ENST00000423946 935 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AL121601.2-201ENST00000438019 707 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPL23AP15-201ENST00000450202 459 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC245028.2-201ENST00000458673 253 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC126182.1-201ENST00000478134 357 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPL7P18-201ENST00000478965 734 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPL7P39-201ENST00000481157 744 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPS4XP1-201ENST00000482189 787 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC093270.2-201ENST00000486157 792 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 HMGB3P13-201ENST00000511263 607 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RN7SKP82-201ENST00000516786 223 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RNU6-678P-201ENST00000516832 109 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AF279873.1-201ENST00000523393 313 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 OR4C2P-201ENST00000530855 1064 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RPL10P14-201ENST00000565265 298 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 MIR3912-201ENST00000577566 105 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 RN7SL356P-201ENST00000582228 248 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ELOCP28-201ENST00000590044 317 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC018714.1-201ENST00000605028 208 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC007684.1-201ENST00000609671 477 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC013476.2-201ENST00000614456 459 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AL121873.1-201ENST00000616013 524 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC022106.2-201ENST00000620114 757 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 MIR6837-201ENST00000620884 64 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC093648.1-201ENST00000623546 606 ntBASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIMC1Q8NDZ2 AC011477.1-204ENST00000623416 1325 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AC006210.2-201ENST00000367074 1545 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 RNA5SP339-201ENST00000390987 122 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 RPS3AP24-201ENST00000407896 734 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 COX5BP7-201ENST00000414780 274 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 MTND4P28-201ENST00000426217 387 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AL137845.2-201ENST00000444292 988 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 NOP56P2-201ENST00000447491 769 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 HMGN3P1-201ENST00000453847 193 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 TPT1P7-201ENST00000458300 517 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 RN7SL860P-201ENST00000473738 223 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AC109486.1-201ENST00000486833 374 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 UBA52P3-201ENST00000491303 382 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 RPL15P21-201ENST00000495592 567 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AC096751.1-202ENST00000502691 1067 ntBASIC4.98□□□□□ -1.61
SIMC1Q8NDZ2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms