Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RPS26P39-201ENST00000469206 341 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 RN7SL447P-201ENST00000494711 245 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 PTGES3P3-201ENST00000511479 482 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 SNORA70.11-201ENST00000515987 138 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 RNA5SP216-201ENST00000516111 123 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 SNORA70.13-201ENST00000516116 138 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 OR8Q1P-201ENST00000526467 655 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC027026.1-201ENST00000532323 742 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AP002373.2-201ENST00000541631 1060 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC009977.1-201ENST00000586015 570 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 FKBP1AP1-201ENST00000594588 318 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AL133338.2-201ENST00000604292 736 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC104458.1-201ENST00000608243 463 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC103710.1-201ENST00000610003 901 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AL512624.1-201ENST00000613638 469 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC108479.2-201ENST00000617314 601 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 DUXAP9-208ENST00000622815 614 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 MTND4P29-201ENST00000503122 1372 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 VPS35P1-201ENST00000563400 1518 ntBASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM48Q8IWZ4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC068870.1-201ENST00000563737 2455 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 MIR506-201ENST00000384998 124 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RNU1-149P-201ENST00000390870 161 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 HMGB3P7-201ENST00000400214 611 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 CALM2P3-201ENST00000400429 449 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC016831.2-201ENST00000417179 352 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ELOCP14-201ENST00000428070 331 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AL358934.1-201ENST00000432346 324 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RPS26P40-201ENST00000435209 294 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 CYCSP12-201ENST00000437729 300 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ELOCP7-201ENST00000439968 331 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AL035551.1-201ENST00000446931 348 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC105399.1-202ENST00000447303 205 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RPS23P9-201ENST00000448848 438 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AL133244.1-201ENST00000456007 258 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ACTR3P3-201ENST00000480448 893 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC026412.2-201ENST00000512270 1075 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC022878.1-201ENST00000530684 149 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 MIR544B-201ENST00000582372 78 ntBASIC5.37□□□□□ -1.55
TRIM48Q8IWZ4 AC005730.3-201ENST00000583067 366 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms