Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC124947.2-202ENST00000552735 133 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC005034.5-201ENST00000604219 466 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC018695.5-201ENST00000605872 315 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC093799.2-201ENST00000610062 578 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC007497.1-201ENST00000610421 561 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AL121612.2-201ENST00000612261 482 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC063943.3-201ENST00000615562 356 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC007342.8-201ENST00000623278 678 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 SAMMSON-227ENST00000642114 1199 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC112198.2-201ENST00000426589 6996 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 THAP12P4-201ENST00000528321 2266 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 MTCO1P6-201ENST00000481192 1384 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 RN7SKP226-201ENST00000364912 300 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 SNORA70.10-201ENST00000384515 134 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 SNORD115-47-201ENST00000391226 86 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC013442.1-201ENST00000397347 228 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 SPTLC1P2-201ENST00000407089 121 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AP000357.1-201ENST00000409926 1165 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RN7SKP56-201ENST00000410513 331 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 GJA6P-201ENST00000415117 1042 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 RPL21P32-201ENST00000419877 477 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 MTCO3P1-205ENST00000422088 832 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AP001324.1-201ENST00000428553 399 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 TMX2P1-201ENST00000436507 708 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC092427.1-201ENST00000439177 601 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 UBE2V1P3-201ENST00000439651 417 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RPS29P9-201ENST00000440360 171 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AL450023.3-201ENST00000440592 271 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AL662791.1-201ENST00000441992 928 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC004865.1-201ENST00000442276 1003 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RAB11AP1-201ENST00000442978 646 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 ARL5AP2-201ENST00000444698 533 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AL691482.1-201ENST00000453255 87 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 HMGB1P4-201ENST00000455362 567 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 RPSAP50-201ENST00000481955 852 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RN7SL441P-201ENST00000492388 296 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC023424.1-201ENST00000496058 459 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 RNA5SP43-201ENST00000516559 110 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RNU6-1308P-201ENST00000516817 103 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RNA5SP230-201ENST00000517039 122 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 GLYCAM1-201ENST00000546596 285 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC004217.3-201ENST00000551552 878 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 NDUFB4P11-201ENST00000560510 395 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 BNIP3P4-201ENST00000604946 565 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC024560.3-201ENST00000608482 349 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 AC069209.1-201ENST00000619282 651 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 CR381653.2-201ENST00000624041 768 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VRK3Q8IV63 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VRK3Q8IV63 AL079343.1-201ENST00000572358 1771 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 MTND5P17-201ENST00000418405 1603 ntBASIC4.93□□□□□ -1.62
VRK3Q8IV63 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms