Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 OR5H2-201ENST00000355273 945 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 SNORD116-1-201ENST00000384335 95 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 SFR1P1-201ENST00000403720 688 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 RNU6-575P-201ENST00000411326 105 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC013429.2-201ENST00000418798 781 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 MTCO1P3-201ENST00000429327 192 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC092013.1-201ENST00000438795 332 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC007327.1-201ENST00000447461 264 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 SCARNA10-201ENST00000459255 330 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 RPL21P126-201ENST00000470049 478 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC104763.1-201ENST00000475274 360 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC091951.3-201ENST00000504093 246 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC134698.5-201ENST00000519444 336 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC005868.1-201ENST00000536421 331 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 ZNF321P-202ENST00000550843 495 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC109446.2-201ENST00000567872 497 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC133552.5-201ENST00000604266 540 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL109618.2-201ENST00000605527 211 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AP005019.3-201ENST00000620418 560 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 AC025263.3-201ENST00000622965 1396 ntBASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM71Q2Q1W2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AP001273.1-201ENST00000624493 3152 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 SNORA71.2-201ENST00000364941 134 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 MIR16-1-201ENST00000385271 89 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RPS24P12-201ENST00000402084 394 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RPL21P67-201ENST00000402896 478 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 NCSTNP1-201ENST00000406229 144 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AL512430.2-201ENST00000406786 339 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 MIR1271-201ENST00000408537 86 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RNU6-272P-201ENST00000411028 104 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC016907.1-201ENST00000419483 435 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 MTND2P18-201ENST00000419962 1030 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RPL7P57-201ENST00000423238 740 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 HMGB1P16-201ENST00000447155 540 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC104306.1-201ENST00000449702 371 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC090142.1-201ENST00000465776 462 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AP001269.3-201ENST00000588718 329 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC123786.2-201ENST00000603459 275 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC011939.3-201ENST00000613686 466 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC114781.5-201ENST00000615297 108 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC009318.3-201ENST00000616916 503 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 BX005214.3-202ENST00000619809 325 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 AC025031.4-201ENST00000621248 3271 ntBASIC5.09□□□□□ -1.59
TRIM71Q2Q1W2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
TRIM71Q2Q1W2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms