Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNA5SP315-201ENST00000516340 116 ntBASIC2.19□□□□□ -2.06
RPS28P62857 RNA5SP312-201ENST00000517068 116 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.19□□□□□ -2.06
RPS28P62857 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 AC123767.1-204ENST00000523523 273 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC2.19□□□□□ -2.06
RPS28P62857 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 AC006064.5-201ENST00000541782 248 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 KARS-209ENST00000568378 459 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 AC005244.1-201ENST00000582566 339 ntBASIC2.19□□□□□ -2.06
RPS28P62857 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
RPS28P62857 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AP004607.9-201ENST00000618202 316 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC092650.2-201ENST00000619984 902 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC005753.1-201ENST00000623837 618 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC010297.1-201ENST00000623948 149 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC005691.1-201ENST00000624723 401 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL353662.3-201ENST00000625131 237 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AC010733.2-201ENST00000589496 5702 ntBASIC2.19□□□□□ -2.06
RPS28P62857 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
RPS28P62857 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AC009487.2-201ENST00000420969 6821 ntBASIC2.18□□□□□ -2.06
RPS28P62857 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RPS28P62857 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RPS28P62857 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 MT-TC-201ENST00000387405 66 ntBASIC2.18□□□□□ -2.06
RPS28P62857 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 SFR1P1-201ENST00000403720 688 ntBASIC2.18□□□□□ -2.06
RPS28P62857 PRRC2CP1-201ENST00000404428 159 ntBASIC2.18□□□□□ -2.06
RPS28P62857 OR4F1P-201ENST00000405102 938 ntBASIC2.18□□□□□ -2.06
RPS28P62857 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AC092638.1-201ENST00000411966 1275 ntBASIC2.18□□□□□ -2.06
RPS28P62857 RSU1P3-201ENST00000412878 835 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 OR4F2P-201ENST00000424047 938 ntBASIC2.18□□□□□ -2.06
RPS28P62857 OSTCP4-201ENST00000424397 449 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AL160175.1-201ENST00000428124 247 ntBASIC2.18□□□□□ -2.06
RPS28P62857 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC2.18□□□□□ -2.06
RPS28P62857 AC126120.1-201ENST00000431082 470 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC2.18□□□□□ -2.06
RPS28P62857 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 AC019080.2-201ENST00000453859 394 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 RPL7P9-201ENST00000468715 747 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AC010350.1-201ENST00000504908 231 ntBASIC2.18□□□□□ -2.06
RPS28P62857 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC2.18□□□□□ -2.06
RPS28P62857 NACAP5-201ENST00000509863 636 ntBASIC2.18□□□□□ -2.06
RPS28P62857 RAC1P2-201ENST00000511164 579 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 RNU1-6P-201ENST00000516290 144 ntBASIC2.18□□□□□ -2.06
RPS28P62857 SNORA31.15-201ENST00000516771 132 ntBASIC2.18□□□□□ -2.06
RPS28P62857 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 AP001804.3-201ENST00000525146 880 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AP003385.6-201ENST00000531603 374 ntBASIC2.18□□□□□ -2.06
RPS28P62857 CCDC58P5-201ENST00000536923 432 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AC004486.1-201ENST00000546846 233 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AC090877.1-201ENST00000561418 344 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC2.18□□□□□ -2.06
RPS28P62857 AC012616.1-201ENST00000600294 197 ntBASIC2.18□□□□□ -2.06
RPS28P62857 BNIP3P38-201ENST00000601117 544 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC211469.1-201ENST00000604263 394 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AP004372.1-201ENST00000604842 844 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC117490.2-201ENST00000610042 594 ntBASIC2.18□□□□□ -2.06
RPS28P62857 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AC027559.1-201ENST00000636288 271 ntBASIC2.18□□□□□ -2.06
RPS28P62857 AL359893.1-201ENST00000447628 1580 ntBASIC2.18□□□□□ -2.06
RPS28P62857 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPS28P62857 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.18□□□□□ -2.06
RPS28P62857 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms