Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC093815.1-201ENST00000508637 280 ntBASIC3.67□□□□□ -1.82
HTTP42858 AC021146.3-201ENST00000511911 260 ntBASIC3.67□□□□□ -1.82
HTTP42858 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.67□□□□□ -1.82
HTTP42858 AC108206.1-201ENST00000570186 4159 ntBASIC3.67□□□□□ -1.82
HTTP42858 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HTTP42858 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 OR13C3-201ENST00000374781 1108 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC093156.1-201ENST00000440382 670 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 KCTD9P6-201ENST00000522306 950 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.66□□□□□ -1.82
HTTP42858 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AC079089.3-201ENST00000603094 673 ntBASIC3.66□□□□□ -1.82
HTTP42858 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HTTP42858 AC116096.1-201ENST00000566804 2314 ntBASIC3.66□□□□□ -1.82
HTTP42858 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HTTP42858 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AC020914.4-201ENST00000597690 277 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC010266.2-201ENST00000564741 3255 ntBASIC3.66□□□□□ -1.82
HTTP42858 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 AC093849.1-201ENST00000563631 2209 ntBASIC3.66□□□□□ -1.82
HTTP42858 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 MTCO1P8-201ENST00000416914 1523 ntBASIC3.66□□□□□ -1.82
HTTP42858 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HTTP42858 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AC007899.1-201ENST00000412776 775 ntBASIC3.66□□□□□ -1.82
HTTP42858 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.66□□□□□ -1.82
HTTP42858 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.66□□□□□ -1.82
HTTP42858 AC087312.1-201ENST00000471411 480 ntBASIC3.66□□□□□ -1.82
HTTP42858 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HTTP42858 UBTFL9-201ENST00000534504 1148 ntBASIC3.66□□□□□ -1.82
HTTP42858 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.66□□□□□ -1.82
HTTP42858 AC026979.4-201ENST00000606555 645 ntBASIC3.66□□□□□ -1.82
HTTP42858 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC3.66□□□□□ -1.82
HTTP42858 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HTTP42858 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.82
HTTP42858 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.65□□□□□ -1.82
HTTP42858 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HTTP42858 AC003985.2-201ENST00000562268 1669 ntBASIC3.65□□□□□ -1.82
HTTP42858 MTND4P22-201ENST00000413116 1169 ntBASIC3.65□□□□□ -1.82
HTTP42858 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.65□□□□□ -1.82
HTTP42858 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.82
HTTP42858 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HTTP42858 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.83
HTTP42858 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HTTP42858 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.65□□□□□ -1.83
HTTP42858 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.65□□□□□ -1.83
HTTP42858 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HTTP42858 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.65□□□□□ -1.83
HTTP42858 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.65□□□□□ -1.83
HTTP42858 AC126389.1-201ENST00000477436 290 ntBASIC3.65□□□□□ -1.83
HTTP42858 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.65□□□□□ -1.83
HTTP42858 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.65□□□□□ -1.83
HTTP42858 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.65□□□□□ -1.83
HTTP42858 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
HTTP42858 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HTTP42858 AC091905.1-201ENST00000624400 311 ntBASIC3.65□□□□□ -1.83
HTTP42858 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.65□□□□□ -1.83
HTTP42858 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HTTP42858 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
HTTP42858 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HTTP42858 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.64□□□□□ -1.83
HTTP42858 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 FAM172BP-201ENST00000487497 1089 ntBASIC3.64□□□□□ -1.83
HTTP42858 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 AC006557.5-201ENST00000603126 811 ntBASIC3.64□□□□□ -1.83
HTTP42858 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HTTP42858 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.64□□□□□ -1.83
HTTP42858 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HTTP42858 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HTTP42858 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 ATP5HP2-201ENST00000433885 485 ntBASIC3.64□□□□□ -1.83
HTTP42858 MRPS33P4-201ENST00000434892 317 ntBASIC3.64□□□□□ -1.83
HTTP42858 NPM1P39-201ENST00000449818 867 ntBASIC3.64□□□□□ -1.83
HTTP42858 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.64□□□□□ -1.83
HTTP42858 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HTTP42858 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.64□□□□□ -1.83
HTTP42858 HCFC2P1-201ENST00000392864 1592 ntBASIC3.64□□□□□ -1.83
HTTP42858 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms