Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 SNORA4.1-201ENST00000364263 144 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 RNU6-921P-201ENST00000384361 107 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.73□□□□□ -1.49
CNGA1P29973 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.73□□□□□ -1.49
CNGA1P29973 AF186996.5-201ENST00000418098 904 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AL590609.2-201ENST00000421430 368 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.73□□□□□ -1.49
CNGA1P29973 RPL7P11-201ENST00000437586 658 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 KATNBL1P3-201ENST00000443475 909 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC097262.1-201ENST00000452559 548 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 RN7SL814P-201ENST00000487715 300 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC026979.1-201ENST00000492525 396 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 RNY4P37-201ENST00000516225 96 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.73□□□□□ -1.49
CNGA1P29973 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.73□□□□□ -1.49
CNGA1P29973 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 CYCSP28-201ENST00000534284 321 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 TOMM20P2-201ENST00000540082 421 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 DPRXP4-201ENST00000578053 568 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 RN7SL290P-201ENST00000578661 300 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 MIR4716-201ENST00000579628 84 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.73□□□□□ -1.49
CNGA1P29973 AL512782.1-201ENST00000603093 364 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC124312.4-201ENST00000605533 310 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC006270.3-201ENST00000605967 1036 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AP001521.2-201ENST00000608772 546 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 AC122133.1-201ENST00000613964 233 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 MIR6864-201ENST00000617935 70 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 MIR6839-201ENST00000620425 113 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 THAP12P5-201ENST00000405864 2275 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 AC007529.1-201ENST00000418574 2178 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
CNGA1P29973 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNGA1P29973 AL513185.3-201ENST00000433335 1300 ntBASIC5.73□□□□□ -1.49
CNGA1P29973 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CNGA1P29973 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CNGA1P29973 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.72□□□□□ -1.49
CNGA1P29973 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.72□□□□□ -1.49
CNGA1P29973 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CNGA1P29973 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CNGA1P29973 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CNGA1P29973 MIR298-201ENST00000401212 88 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC004022.2-201ENST00000413824 193 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 RPL12P46-201ENST00000436610 195 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 OR7E125P-201ENST00000443450 846 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 RPS26P56-201ENST00000444468 240 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 MTND2P19-201ENST00000449129 1012 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 RPL18AP17-201ENST00000455326 198 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC013828.1-201ENST00000481845 158 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 ENPP7P11-201ENST00000505915 627 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC018797.3-201ENST00000513388 1241 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 NPM1P6-201ENST00000521088 871 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 AC107918.3-201ENST00000533272 382 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.72□□□□□ -1.49
CNGA1P29973 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.72□□□□□ -1.49
CNGA1P29973 SULT1C2P1-202ENST00000562418 459 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.72□□□□□ -1.49
CNGA1P29973 MIR4472-2-201ENST00000582069 67 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 MIR3936-201ENST00000584304 110 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AC018714.1-201ENST00000605028 208 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AL391358.1-201ENST00000605342 190 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.72□□□□□ -1.49
CNGA1P29973 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.72□□□□□ -1.49
CNGA1P29973 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 AC099654.2-201ENST00000433031 1980 ntBASIC5.72□□□□□ -1.49
CNGA1P29973 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.72□□□□□ -1.49
CNGA1P29973 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNGA1P29973 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms