Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL1A1P02452 RNU6-283P-201ENST00000364788 107 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 Y_RNA.500-201ENST00000384466 111 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 U3.39-201ENST00000408569 239 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.25□□□□□ -1.73
COL1A1P02452 NPM1P39-201ENST00000449818 867 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 BTF3P5-201ENST00000457252 467 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 SYT14P1-201ENST00000481459 721 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 RPL21P13-201ENST00000488305 481 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.25□□□□□ -1.73
COL1A1P02452 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.25□□□□□ -1.73
COL1A1P02452 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.25□□□□□ -1.73
COL1A1P02452 AC022882.1-201ENST00000532142 501 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.25□□□□□ -1.73
COL1A1P02452 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.25□□□□□ -1.73
COL1A1P02452 AC127502.3-201ENST00000636170 1206 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL1A1P02452 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL1A1P02452 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.25□□□□□ -1.73
COL1A1P02452 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.25□□□□□ -1.73
COL1A1P02452 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
COL1A1P02452 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.25□□□□□ -1.73
COL1A1P02452 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.25□□□□□ -1.73
COL1A1P02452 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL1A1P02452 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL1A1P02452 SNORA48.2-201ENST00000390926 124 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 BX323014.1-201ENST00000412876 237 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 MTND2P25-201ENST00000449028 610 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 UBE2DNL-203ENST00000474922 222 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 NPM1P17-201ENST00000479221 602 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 PRELID3BP6-201ENST00000503839 571 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC009303.3-201ENST00000591103 736 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 MIR7112-201ENST00000616126 65 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 AC103858.2-201ENST00000621471 543 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.24□□□□□ -1.73
COL1A1P02452 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
COL1A1P02452 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC087190.4-201ENST00000574616 8334 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 HSPE1P8-201ENST00000406997 288 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 HSPE1P27-201ENST00000430808 296 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 AL136126.1-201ENST00000473603 402 ntBASIC4.24□□□□□ -1.73
COL1A1P02452 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.24□□□□□ -1.73
COL1A1P02452 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.24□□□□□ -1.73
COL1A1P02452 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL1A1P02452 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.23□□□□□ -1.73
COL1A1P02452 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL1A1P02452 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL1A1P02452 BMS1P3-201ENST00000372011 932 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 VN1R51P-201ENST00000411675 945 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.23□□□□□ -1.73
COL1A1P02452 MTND6P6-201ENST00000478031 263 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.23□□□□□ -1.73
COL1A1P02452 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.23□□□□□ -1.73
COL1A1P02452 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.23□□□□□ -1.73
COL1A1P02452 AL137843.1-201ENST00000605078 385 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 AC011816.2-201ENST00000607089 556 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.23□□□□□ -1.73
COL1A1P02452 AL354976.1-201ENST00000613843 387 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 AL359715.5-201ENST00000623431 443 ntBASIC4.23□□□□□ -1.73
COL1A1P02452 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL1A1P02452 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL1A1P02452 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL1A1P02452 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL1A1P02452 AL645937.1-201ENST00000641739 1652 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.22□□□□□ -1.73
COL1A1P02452 OTUD4P1-201ENST00000237841 3067 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL1A1P02452 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.22□□□□□ -1.73
COL1A1P02452 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.22□□□□□ -1.73
COL1A1P02452 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL1A1P02452 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL1A1P02452 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL1A1P02452 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 SNORA48.5-201ENST00000391143 135 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.22□□□□□ -1.73
COL1A1P02452 AC074367.1-201ENST00000438685 1125 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.22□□□□□ -1.73
COL1A1P02452 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.22□□□□□ -1.73
COL1A1P02452 RN7SL594P-201ENST00000470590 287 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 OR5AP1P-201ENST00000529730 940 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.22□□□□□ -1.73
COL1A1P02452 MIR5004-201ENST00000579078 107 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.22□□□□□ -1.73
COL1A1P02452 AL513477.2-201ENST00000607858 568 ntBASIC4.22□□□□□ -1.73
COL1A1P02452 CR392039.4-201ENST00000624968 501 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms