Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 HIGD1AP12-201ENST00000427832 281 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 NPM1P39-201ENST00000449818 867 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 RFPL4AP5-201ENST00000514977 504 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AC005242.1-201ENST00000585658 438 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 AL132656.3-201ENST00000606384 1595 ntBASIC3.52□□□□□ -1.85
CHD7Q9P2D1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.52□□□□□ -1.85
CHD7Q9P2D1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 MTND4P22-201ENST00000413116 1169 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC108734.1-201ENST00000439549 399 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC026801.2-201ENST00000515352 425 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC022080.3-201ENST00000544433 482 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 MTND6P33-201ENST00000571794 183 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 NUP35P1-201ENST00000422734 947 ntBASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD7Q9P2D1 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.5□□□□□ -1.85
CHD7Q9P2D1 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 FCF1P8-201ENST00000510322 597 ntBASIC3.5□□□□□ -1.85
CHD7Q9P2D1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.5□□□□□ -1.85
CHD7Q9P2D1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CHD7Q9P2D1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AL121766.1-201ENST00000547436 487 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC245100.7-201ENST00000609678 442 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 Y_RNA.638-201ENST00000459374 113 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 OR4R3P-201ENST00000525084 838 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 AC006946.3-201ENST00000609791 756 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 IPO8P1-201ENST00000455509 3109 ntBASIC3.49□□□□□ -1.85
CHD7Q9P2D1 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD7Q9P2D1 RPL32P28-201ENST00000443577 397 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC087312.1-201ENST00000471411 480 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms