Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RABEPKP1-201ENST00000440529 1026 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 PGBD4P3-201ENST00000440731 581 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RPS7P5-201ENST00000441482 581 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RPL26P28-201ENST00000451325 435 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC016724.1-201ENST00000453215 421 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SETP20-201ENST00000457046 852 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RN7SL570P-201ENST00000484405 292 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC090638.1-201ENST00000498296 909 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC021678.1-201ENST00000505195 936 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 GLUD1P3-202ENST00000508551 200 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC106872.4-201ENST00000510050 523 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC026412.2-201ENST00000512270 1075 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 GAPDHP62-201ENST00000515313 990 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-150P-201ENST00000516237 95 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 IGKV3D-34-201ENST00000522638 302 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AF235103.2-201ENST00000525753 346 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC137627.1-201ENST00000545761 289 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC125611.2-201ENST00000551907 647 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL390334.1-201ENST00000556395 450 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC025678.1-201ENST00000567861 338 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SUGT1P3-202ENST00000604259 383 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC055876.5-201ENST00000605667 259 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC018695.5-201ENST00000605872 315 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL136295.6-201ENST00000610486 658 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC234782.5-201ENST00000617723 324 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC018926.3-201ENST00000618841 406 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC116563.2-201ENST00000624751 535 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC007842.1-201ENST00000597336 2039 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 MAPK10-328ENST00000641553 4009 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 OR9K1P-202ENST00000641111 3217 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 GAPDHP24-201ENST00000328713 983 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 FAT1P1-201ENST00000406588 507 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 RN7SKP279-201ENST00000411383 298 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 SDCBPP3-201ENST00000419629 891 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ISCA1P6-201ENST00000427740 390 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 HMGB3P24-201ENST00000433260 622 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 MTND6P13-201ENST00000443510 523 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 CYCSP51-201ENST00000443545 318 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 OR6K1P-201ENST00000456766 971 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC022364.2-201ENST00000457963 554 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 RNU7-27P-201ENST00000459281 62 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 HMGB1P29-201ENST00000505659 499 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms