Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC009120.2-204ENST00000621548 2032 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.234-201ENST00000364409 97 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 MIR320B1-201ENST00000390209 79 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC093106.2-201ENST00000428212 385 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC079807.1-201ENST00000429993 481 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 UBBP5-201ENST00000446970 266 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 RPL7L1P7-201ENST00000509986 724 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 RNU6-971P-201ENST00000516920 106 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 RNU6-685P-201ENST00000517088 95 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 MIR6885-201ENST00000612241 66 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.802-201ENST00000614892 130 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC084757.4-201ENST00000616350 526 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 LPAL2-203ENST00000454031 2498 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.27-201ENST00000362540 103 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AL033519.2-201ENST00000403958 392 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AL357075.1-201ENST00000404107 726 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 EI24P1-201ENST00000416584 867 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 RPS12P5-201ENST00000423449 371 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC098828.1-201ENST00000436164 440 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 RPEP4-201ENST00000437636 602 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC099340.1-201ENST00000475247 599 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC021382.1-201ENST00000483523 359 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 RNY3P16-201ENST00000516338 101 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 pRNA.12-201ENST00000614353 90 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 pRNA.3-201ENST00000615048 90 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AL049794.2-201ENST00000616301 365 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC073488.9-201ENST00000631601 754 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 AC073488.6-201ENST00000632293 754 ntBASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCAF1Q9H7N4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AL138713.1-201ENST00000624026 2130 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 HSP90AA4P-202ENST00000506915 2228 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 SMG1P1-202ENST00000309865 4223 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AL596244.1-201ENST00000567068 3779 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AL022163.1-201ENST00000430261 1569 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 SNORD113-8-201ENST00000363497 74 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 SNORA30-201ENST00000384028 129 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AL034374.1-201ENST00000406329 351 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 HMGN3P1-201ENST00000453847 193 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 snoU13.8-201ENST00000458890 104 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AC010409.1-201ENST00000487382 476 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 TRAPPC2P7-201ENST00000509650 231 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AC009779.4-201ENST00000554248 611 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 AC017100.2-201ENST00000584628 355 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 MIR7109-201ENST00000613748 65 ntBASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SCAF1Q9H7N4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 AP000866.6-201ENST00000638898 3579 ntBASIC11.03□□□□□ -0.64
SCAF1Q9H7N4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms