Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 BX649567.1-201ENST00000642071 1134 ntBASIC4.08□□□□□ -1.76
UBQLN3Q9H347 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBQLN3Q9H347 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
UBQLN3Q9H347 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
UBQLN3Q9H347 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
UBQLN3Q9H347 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
UBQLN3Q9H347 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC087190.4-201ENST00000574616 8334 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AL627171.1-201ENST00000618845 1308 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC067945.1-201ENST00000342609 618 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RNU1-130P-201ENST00000363930 160 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RNU6-925P-201ENST00000384629 104 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 MIR124-3-201ENST00000384866 87 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RPL7P27-201ENST00000403775 720 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RPS12P10-201ENST00000427031 377 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RPL23AP15-201ENST00000450202 459 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RPL23AP24-201ENST00000458203 385 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC090071.1-201ENST00000507713 644 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC008885.2-201ENST00000509506 930 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RNU6-416P-201ENST00000516265 103 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 ZNF971P-201ENST00000562068 1249 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 Z82195.1-201ENST00000604558 398 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AP003117.2-201ENST00000606010 545 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AL391834.2-201ENST00000609982 546 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 MIR6891-201ENST00000618788 93 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC006065.6-201ENST00000625201 545 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC025031.4-201ENST00000621248 3271 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 AC027290.2-201ENST00000623210 18662 ntBASIC4.07□□□□□ -1.76
UBQLN3Q9H347 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
UBQLN3Q9H347 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RNA5SP307-201ENST00000362863 116 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RNA5SP509-201ENST00000364577 119 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RNU6-298P-201ENST00000390888 96 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC136624.1-201ENST00000400791 413 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 PRRC2CP1-201ENST00000404428 159 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RNU4-25P-201ENST00000410569 230 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RAB28P1-201ENST00000411517 641 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 TCEA1P2-201ENST00000420496 906 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC073335.1-201ENST00000427776 363 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC012671.1-201ENST00000451912 203 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 DDX39BP2-208ENST00000453923 258 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 MTATP6P14-201ENST00000455189 673 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC011276.1-201ENST00000469688 323 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC104982.1-201ENST00000478775 574 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC026414.1-201ENST00000504046 698 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 HPRT1P1-201ENST00000509498 657 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RN7SKP96-201ENST00000516948 297 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC074029.1-201ENST00000552531 1044 ntBASIC4.06□□□□□ -1.76
UBQLN3Q9H347 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.06□□□□□ -1.76
UBQLN3Q9H347 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms