Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 ZNF962P-201ENST00000443465 3140 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 OR1S2-201ENST00000302592 978 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 SNORD17-201ENST00000390930 237 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 VDAC1P9-201ENST00000412766 841 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.2□□□□□ -1.9
USP9XQ93008 snoU13.18-201ENST00000459483 104 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.2□□□□□ -1.9
USP9XQ93008 NPM1P5-201ENST00000557228 838 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 AC022968.1-201ENST00000567372 442 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
USP9XQ93008 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
USP9XQ93008 RNU6-482P-201ENST00000391068 107 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.2□□□□□ -1.9
USP9XQ93008 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 AC009414.1-201ENST00000427200 443 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 RPL21P40-201ENST00000428586 483 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
USP9XQ93008 AC026801.2-201ENST00000515352 425 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.2□□□□□ -1.9
USP9XQ93008 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.2□□□□□ -1.9
USP9XQ93008 GTF3AP2-201ENST00000557014 266 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.2□□□□□ -1.9
USP9XQ93008 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 AC084036.1-201ENST00000609190 508 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 IGHVIII-44-202ENST00000636235 289 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
USP9XQ93008 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
USP9XQ93008 HSPA8P17-201ENST00000427029 1382 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 AC126323.6-202ENST00000568092 3511 ntBASIC3.2□□□□□ -1.9
USP9XQ93008 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 OSTCP5-201ENST00000425293 453 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.19□□□□□ -1.9
USP9XQ93008 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 RPS26P2-201ENST00000440331 348 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 RPS4XP18-201ENST00000495480 763 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 CKS1BP2-201ENST00000497342 240 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 AC017037.2-201ENST00000513850 890 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 RNA5SP208-201ENST00000516156 78 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.19□□□□□ -1.9
USP9XQ93008 CKS1BP3-201ENST00000600888 237 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 MIR7702-201ENST00000621931 59 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 AL022393.1-201ENST00000625142 1677 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USP9XQ93008 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.19□□□□□ -1.9
USP9XQ93008 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 HSPE1P27-201ENST00000430808 296 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 AL645931.1-201ENST00000439737 410 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.19□□□□□ -1.9
USP9XQ93008 PSMC1P13-201ENST00000458195 985 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 RPL7P47-201ENST00000497299 556 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.19□□□□□ -1.9
USP9XQ93008 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.19□□□□□ -1.9
USP9XQ93008 RAC1P2-201ENST00000511164 579 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 UBE2NP1-201ENST00000545592 458 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.19□□□□□ -1.9
USP9XQ93008 SNORA62.6-201ENST00000606322 83 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
USP9XQ93008 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
USP9XQ93008 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 AC068254.2-201ENST00000623938 3577 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
USP9XQ93008 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 THAP12P5-201ENST00000405864 2275 ntBASIC3.19□□□□□ -1.9
USP9XQ93008 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.19□□□□□ -1.9
USP9XQ93008 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
USP9XQ93008 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.18□□□□□ -1.9
USP9XQ93008 RPL23AP25-201ENST00000430973 463 ntBASIC3.18□□□□□ -1.9
USP9XQ93008 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.18□□□□□ -1.9
USP9XQ93008 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
USP9XQ93008 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.18□□□□□ -1.9
USP9XQ93008 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.18□□□□□ -1.9
USP9XQ93008 ISCA1P3-201ENST00000577104 373 ntBASIC3.18□□□□□ -1.9
USP9XQ93008 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP9XQ93008 U4.6-201ENST00000621618 127 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms