Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC007938.3-201ENST00000604965 623 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 AC099654.6-201ENST00000636487 512 ntBASIC7.4□□□□□ -1.22
RC3H1Q5TC82 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.4□□□□□ -1.22
RC3H1Q5TC82 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 AC010168.2-201ENST00000562691 5428 ntBASIC7.4□□□□□ -1.23
RC3H1Q5TC82 GTF2IP4-201ENST00000453092 2054 ntBASIC7.4□□□□□ -1.23
RC3H1Q5TC82 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RC3H1Q5TC82 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL359195.2-201ENST00000623657 4412 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC007938.2-201ENST00000604666 2634 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 THAP12P9-201ENST00000503971 2360 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 Y_RNA.47-201ENST00000362697 108 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 SUGT1P1-201ENST00000379514 476 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC117470.1-201ENST00000381974 330 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 RNU6-1026P-201ENST00000384465 108 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL133270.1-201ENST00000402635 279 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL450992.3-201ENST00000413192 568 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 HMGA1P8-201ENST00000414130 321 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 SRIP2-201ENST00000428470 166 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 ATP5JP1-201ENST00000431631 322 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL663074.2-201ENST00000440621 479 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 PPP1R2P5-201ENST00000457256 603 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 RPS21P4-201ENST00000487122 248 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC004453.1-201ENST00000487895 408 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 HMGB1P30-201ENST00000492455 606 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 CDH12P2-201ENST00000504393 298 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 GAPDHP56-201ENST00000506031 988 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 RNU6-1261P-201ENST00000517194 104 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC073581.1-201ENST00000519036 575 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC026464.5-201ENST00000562497 722 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC096996.1-201ENST00000563813 325 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 MIR544B-201ENST00000582372 78 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 UBE2L4-201ENST00000587688 464 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 POLR3GP2-201ENST00000588366 668 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC115621.1-201ENST00000604653 858 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC008966.2-201ENST00000606157 453 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC005014.2-201ENST00000607795 599 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 DLEU1_2.1-201ENST00000617920 342 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AC022418.1-201ENST00000624118 445 ntBASIC7.39□□□□□ -1.23
RC3H1Q5TC82 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.39□□□□□ -1.23
RC3H1Q5TC82 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RC3H1Q5TC82 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms