Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC011487.3-201ENST00000593607 453 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 GAS5-AS1-201ENST00000602767 694 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC018754.1-201ENST00000607486 925 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC010424.2-201ENST00000607594 443 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AL031666.3-201ENST00000609320 1006 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 BRAFP1-201ENST00000445336 2703 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 KARSP3-201ENST00000571212 1504 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SCN1BQ07699 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SCN1BQ07699 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 HMGB1P5-201ENST00000255320 642 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SCN1BQ07699 U8.4-201ENST00000363626 134 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN1BQ07699 RNU6-298P-201ENST00000390888 96 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 Y_RNA.578-201ENST00000390903 88 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 RPL23AP48-201ENST00000406913 488 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 RN7SKP229-201ENST00000410465 302 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 RN7SKP167-201ENST00000411047 285 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 RN7SKP273-201ENST00000411392 314 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN1BQ07699 TCEA1P2-201ENST00000420496 906 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 EEF1B2P5-201ENST00000444820 548 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN1BQ07699 COX6CP18-201ENST00000448769 222 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC073850.1-201ENST00000449243 255 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 RPL23AP56-201ENST00000460778 453 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC005532.2-201ENST00000467154 373 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AL136126.1-201ENST00000473603 402 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 RPSAP50-201ENST00000481955 852 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 HPRT1P1-201ENST00000509498 657 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 OR4R3P-201ENST00000525084 838 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 OR4C2P-201ENST00000530855 1064 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 LSM6P2-201ENST00000552208 177 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC007424.1-203ENST00000554613 687 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC093249.4-201ENST00000564755 259 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC006270.2-201ENST00000578523 652 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 AL445435.1-201ENST00000604232 665 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AL121932.1-201ENST00000605542 214 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC233309.1-201ENST00000619522 751 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.06□□□□□ -1.76
SCN1BQ07699 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SCN1BQ07699 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.06□□□□□ -1.76
SCN1BQ07699 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SCN1BQ07699 AL592148.3-201ENST00000608771 2646 ntBASIC4.06□□□□□ -1.76
SCN1BQ07699 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SCN1BQ07699 ZNF734P-201ENST00000419494 1534 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 ZNF37BP-203ENST00000452306 1352 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SCN1BQ07699 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 ANKRD36P1-201ENST00000344424 659 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 RNU6-263P-201ENST00000363811 107 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 RNA5SP167-201ENST00000365461 116 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 Y_RNA.493-201ENST00000384422 102 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 MIR217-201ENST00000384817 110 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 MT-TC-201ENST00000387405 66 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 GTF2IP5-201ENST00000414608 731 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN1BQ07699 RPS27AP12-201ENST00000429552 465 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC005345.1-201ENST00000431868 217 ntBASIC4.05□□□□□ -1.76
SCN1BQ07699 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.05□□□□□ -1.76
SCN1BQ07699 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms