Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CIITAP33076 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.96□□□□□ -1.62
CIITAP33076 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CIITAP33076 RNU1-44P-201ENST00000384453 163 ntBASIC4.96□□□□□ -1.62
CIITAP33076 MIR142-201ENST00000384835 87 ntBASIC4.96□□□□□ -1.62
CIITAP33076 MIR195-201ENST00000385194 87 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AL512430.2-201ENST00000406786 339 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AL356320.2-201ENST00000417263 507 ntBASIC4.96□□□□□ -1.62
CIITAP33076 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.96□□□□□ -1.62
CIITAP33076 TXNL1P1-201ENST00000429528 554 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.96□□□□□ -1.62
CIITAP33076 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CIITAP33076 RPL12P46-201ENST00000436610 195 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.96□□□□□ -1.62
CIITAP33076 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.96□□□□□ -1.62
CIITAP33076 RN7SL303P-201ENST00000469773 251 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.96□□□□□ -1.62
CIITAP33076 AC010285.3-201ENST00000511668 676 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AP002812.4-201ENST00000532139 286 ntBASIC4.96□□□□□ -1.62
CIITAP33076 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.96□□□□□ -1.62
CIITAP33076 ZNF321P-202ENST00000550843 495 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.96□□□□□ -1.62
CIITAP33076 AC018552.3-201ENST00000567416 561 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC061975.8-201ENST00000587058 721 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC091057.2-201ENST00000602594 792 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AL160290.3-201ENST00000604869 165 ntBASIC4.96□□□□□ -1.62
CIITAP33076 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.96□□□□□ -1.62
CIITAP33076 AC011944.2-201ENST00000624440 683 ntBASIC4.96□□□□□ -1.62
CIITAP33076 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.96□□□□□ -1.62
CIITAP33076 AL121594.5-201ENST00000631724 573 ntBASIC4.96□□□□□ -1.62
CIITAP33076 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.96□□□□□ -1.62
CIITAP33076 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CIITAP33076 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CIITAP33076 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CIITAP33076 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.96□□□□□ -1.62
CIITAP33076 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CIITAP33076 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CIITAP33076 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.96□□□□□ -1.62
CIITAP33076 MAPK10-303ENST00000641324 3959 ntBASIC4.96□□□□□ -1.62
CIITAP33076 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.95□□□□□ -1.62
CIITAP33076 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 FAM3C2-201ENST00000312214 681 ntBASIC4.95□□□□□ -1.62
CIITAP33076 ANKRD36P1-201ENST00000344424 659 ntBASIC4.95□□□□□ -1.62
CIITAP33076 RNU6-543P-201ENST00000362576 108 ntBASIC4.95□□□□□ -1.62
CIITAP33076 SNORD116-2-201ENST00000384274 95 ntBASIC4.95□□□□□ -1.62
CIITAP33076 RNU6-636P-201ENST00000384598 107 ntBASIC4.95□□□□□ -1.62
CIITAP33076 SNORD116-6-201ENST00000384711 96 ntBASIC4.95□□□□□ -1.62
CIITAP33076 MIR92A2-201ENST00000385299 75 ntBASIC4.95□□□□□ -1.62
CIITAP33076 HMGB3P18-201ENST00000406327 590 ntBASIC4.95□□□□□ -1.62
CIITAP33076 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 RPL7P32-201ENST00000457119 744 ntBASIC4.95□□□□□ -1.62
CIITAP33076 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 AC079203.1-201ENST00000487972 404 ntBASIC4.95□□□□□ -1.62
CIITAP33076 RN7SL691P-201ENST00000494487 301 ntBASIC4.95□□□□□ -1.62
CIITAP33076 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.95□□□□□ -1.62
CIITAP33076 AC117522.2-201ENST00000510049 657 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC093840.1-201ENST00000511599 336 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC119751.1-201ENST00000513357 765 ntBASIC4.95□□□□□ -1.62
CIITAP33076 OR5BC1P-201ENST00000529327 739 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.95□□□□□ -1.62
CIITAP33076 AC023050.2-201ENST00000544968 387 ntBASIC4.95□□□□□ -1.62
CIITAP33076 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 MTCYBP27-201ENST00000555160 670 ntBASIC4.95□□□□□ -1.62
CIITAP33076 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 RPL21P7-201ENST00000557463 483 ntBASIC4.95□□□□□ -1.62
CIITAP33076 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 AC023813.2-201ENST00000564321 469 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC069366.1-201ENST00000583159 838 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC015688.2-201ENST00000584523 262 ntBASIC4.95□□□□□ -1.62
CIITAP33076 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.95□□□□□ -1.62
CIITAP33076 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 AL353778.1-201ENST00000603149 408 ntBASIC4.95□□□□□ -1.62
CIITAP33076 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.95□□□□□ -1.62
CIITAP33076 AL451064.1-201ENST00000607718 471 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AL445423.1-201ENST00000609941 536 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC055764.2-201ENST00000610089 670 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC009237.15-201ENST00000610252 501 ntBASIC4.95□□□□□ -1.62
CIITAP33076 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 AL021997.2-201ENST00000615674 271 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 AC140479.6-201ENST00000633535 357 ntBASIC4.95□□□□□ -1.62
CIITAP33076 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.95□□□□□ -1.62
CIITAP33076 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.95□□□□□ -1.62
CIITAP33076 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.95□□□□□ -1.62
CIITAP33076 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CIITAP33076 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms