Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AC006213.6-201ENST00000623722 4179 ntBASIC8.13□□□□□ -1.11
CD44P16070 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
CD44P16070 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC8.13□□□□□ -1.11
CD44P16070 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CD44P16070 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.12□□□□□ -1.11
CD44P16070 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 AC007996.1-201ENST00000620414 2821 ntBASIC8.12□□□□□ -1.11
CD44P16070 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 CTAGE11P-201ENST00000451540 2353 ntBASIC8.12□□□□□ -1.11
CD44P16070 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CD44P16070 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 KARSP2-201ENST00000415696 1639 ntBASIC8.12□□□□□ -1.11
CD44P16070 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CD44P16070 RNU4-44P-201ENST00000363050 141 ntBASIC8.12□□□□□ -1.11
CD44P16070 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
CD44P16070 DBIP1-201ENST00000401435 260 ntBASIC8.12□□□□□ -1.11
CD44P16070 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 RPL24P2-201ENST00000421023 475 ntBASIC8.12□□□□□ -1.11
CD44P16070 DUTP4-201ENST00000424782 475 ntBASIC8.12□□□□□ -1.11
CD44P16070 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 AC005094.1-201ENST00000440420 368 ntBASIC8.12□□□□□ -1.11
CD44P16070 AL451074.4-201ENST00000447545 470 ntBASIC8.12□□□□□ -1.11
CD44P16070 RN7SL88P-201ENST00000480166 299 ntBASIC8.12□□□□□ -1.11
CD44P16070 AC005840.1-201ENST00000498412 377 ntBASIC8.12□□□□□ -1.11
CD44P16070 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC8.12□□□□□ -1.11
CD44P16070 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 AC026700.1-201ENST00000512074 544 ntBASIC8.12□□□□□ -1.11
CD44P16070 RN7SKP196-201ENST00000516267 345 ntBASIC8.12□□□□□ -1.11
CD44P16070 AC100784.1-201ENST00000522790 310 ntBASIC8.12□□□□□ -1.11
CD44P16070 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 AL133153.1-201ENST00000557756 303 ntBASIC8.12□□□□□ -1.11
CD44P16070 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC8.12□□□□□ -1.11
CD44P16070 MIR5192-201ENST00000579892 92 ntBASIC8.12□□□□□ -1.11
CD44P16070 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 AL121985.2-201ENST00000621192 555 ntBASIC8.12□□□□□ -1.11
CD44P16070 AL136313.1-201ENST00000624804 202 ntBASIC8.12□□□□□ -1.11
CD44P16070 AP000766.1-201ENST00000561746 4140 ntBASIC8.12□□□□□ -1.11
CD44P16070 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.12□□□□□ -1.11
CD44P16070 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 AC009812.4-201ENST00000569134 1805 ntBASIC8.12□□□□□ -1.11
CD44P16070 AC114947.2-201ENST00000565748 2125 ntBASIC8.12□□□□□ -1.11
CD44P16070 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.12□□□□□ -1.11
CD44P16070 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.12□□□□□ -1.11
CD44P16070 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
CD44P16070 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
CD44P16070 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
CD44P16070 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 AC022034.1-201ENST00000512867 2156 ntBASIC8.11□□□□□ -1.11
CD44P16070 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 NCAPGP1-201ENST00000505112 1814 ntBASIC8.11□□□□□ -1.11
CD44P16070 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.11□□□□□ -1.11
CD44P16070 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 RNU1-21P-201ENST00000363327 163 ntBASIC8.11□□□□□ -1.11
CD44P16070 RN7SKP1-201ENST00000365525 307 ntBASIC8.11□□□□□ -1.11
CD44P16070 RNU6-444P-201ENST00000383988 108 ntBASIC8.11□□□□□ -1.11
CD44P16070 SNORA51.6-201ENST00000384151 125 ntBASIC8.11□□□□□ -1.11
CD44P16070 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
CD44P16070 AL590290.1-201ENST00000405336 380 ntBASIC8.11□□□□□ -1.11
CD44P16070 RN7SKP89-201ENST00000410774 242 ntBASIC8.11□□□□□ -1.11
CD44P16070 AL030996.1-201ENST00000411430 235 ntBASIC8.11□□□□□ -1.11
CD44P16070 HMGN1P24-201ENST00000412282 298 ntBASIC8.11□□□□□ -1.11
CD44P16070 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC8.11□□□□□ -1.11
CD44P16070 AL133173.1-201ENST00000423458 397 ntBASIC8.11□□□□□ -1.11
CD44P16070 FUNDC2P2-202ENST00000443452 493 ntBASIC8.11□□□□□ -1.11
CD44P16070 RPS29P5-201ENST00000452777 171 ntBASIC8.11□□□□□ -1.11
CD44P16070 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
CD44P16070 RNU7-59P-201ENST00000459101 61 ntBASIC8.11□□□□□ -1.11
CD44P16070 AC040975.1-201ENST00000472104 316 ntBASIC8.11□□□□□ -1.11
CD44P16070 CREM-230ENST00000474931 626 ntTSL 2 BASIC8.11□□□□□ -1.11
CD44P16070 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms