Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BX323046.1-201ENST00000610145 535 ntBASIC4.25□□□□□ -1.73
TO15178 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.25□□□□□ -1.73
TO15178 AL121895.2-201ENST00000619558 447 ntBASIC4.25□□□□□ -1.73
TO15178 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 AP001002.2-201ENST00000625137 386 ntBASIC4.25□□□□□ -1.73
TO15178 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.25□□□□□ -1.73
TO15178 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
TO15178 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TO15178 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.25□□□□□ -1.73
TO15178 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TO15178 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.25□□□□□ -1.73
TO15178 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TO15178 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 AC108467.2-201ENST00000617640 1597 ntBASIC4.24□□□□□ -1.73
TO15178 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 AC073429.2-201ENST00000569694 1444 ntBASIC4.24□□□□□ -1.73
TO15178 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TO15178 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TO15178 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 AC021146.4-201ENST00000309229 279 ntBASIC4.24□□□□□ -1.73
TO15178 RNU4-68P-201ENST00000364314 141 ntBASIC4.24□□□□□ -1.73
TO15178 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.24□□□□□ -1.73
TO15178 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 GLULP6-201ENST00000399502 913 ntBASIC4.24□□□□□ -1.73
TO15178 AC136624.1-201ENST00000400791 413 ntBASIC4.24□□□□□ -1.73
TO15178 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 SFR1P1-201ENST00000403720 688 ntBASIC4.24□□□□□ -1.73
TO15178 GSTA8P-201ENST00000404253 637 ntBASIC4.24□□□□□ -1.73
TO15178 AL136310.1-201ENST00000404926 654 ntBASIC4.24□□□□□ -1.73
TO15178 HNRNPDP2-201ENST00000406475 478 ntBASIC4.24□□□□□ -1.73
TO15178 RPL21P108-201ENST00000413857 481 ntBASIC4.24□□□□□ -1.73
TO15178 AL592310.1-201ENST00000414330 671 ntBASIC4.24□□□□□ -1.73
TO15178 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 RPS3AP37-201ENST00000419176 745 ntBASIC4.24□□□□□ -1.73
TO15178 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 PAICSP7-201ENST00000419829 962 ntBASIC4.24□□□□□ -1.73
TO15178 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 Z74021.1-201ENST00000423610 407 ntBASIC4.24□□□□□ -1.73
TO15178 HIGD1AP12-201ENST00000427832 281 ntBASIC4.24□□□□□ -1.73
TO15178 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.24□□□□□ -1.73
TO15178 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.24□□□□□ -1.73
TO15178 AC069285.2-201ENST00000440210 275 ntBASIC4.24□□□□□ -1.73
TO15178 AL138878.2-201ENST00000440581 1241 ntBASIC4.24□□□□□ -1.73
TO15178 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 AC112492.1-201ENST00000449607 712 ntBASIC4.24□□□□□ -1.73
TO15178 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 CEACAMP6-201ENST00000452007 574 ntBASIC4.24□□□□□ -1.73
TO15178 PTGES3P5-201ENST00000455109 434 ntBASIC4.24□□□□□ -1.73
TO15178 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 SNORD11.1-201ENST00000459482 85 ntBASIC4.24□□□□□ -1.73
TO15178 RPS29P22-201ENST00000472363 168 ntBASIC4.24□□□□□ -1.73
TO15178 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.24□□□□□ -1.73
TO15178 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.24□□□□□ -1.73
TO15178 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 RNU6-311P-201ENST00000516224 102 ntBASIC4.24□□□□□ -1.73
TO15178 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 PTP4A1P6-201ENST00000531034 478 ntBASIC4.24□□□□□ -1.73
TO15178 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.24□□□□□ -1.73
TO15178 AC004217.3-201ENST00000551552 878 ntBASIC4.24□□□□□ -1.73
TO15178 SERPINE4P-201ENST00000554978 281 ntBASIC4.24□□□□□ -1.73
TO15178 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 MIR5708-201ENST00000579723 85 ntBASIC4.24□□□□□ -1.73
TO15178 AC209154.1-201ENST00000582156 337 ntBASIC4.24□□□□□ -1.73
TO15178 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.24□□□□□ -1.73
TO15178 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.24□□□□□ -1.73
TO15178 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.24□□□□□ -1.73
TO15178 BNIP3P38-201ENST00000601117 544 ntBASIC4.24□□□□□ -1.73
TO15178 AL450336.1-201ENST00000605180 586 ntBASIC4.24□□□□□ -1.73
TO15178 AC009974.1-201ENST00000608881 455 ntBASIC4.24□□□□□ -1.73
TO15178 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.24□□□□□ -1.73
TO15178 AL356121.2-201ENST00000624715 780 ntBASIC4.24□□□□□ -1.73
TO15178 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 MFSD8-245ENST00000641743 948 ntBASIC4.24□□□□□ -1.73
TO15178 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.24□□□□□ -1.73
TO15178 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.24□□□□□ -1.73
TO15178 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 AL391684.1-202ENST00000641293 1636 ntBASIC4.24□□□□□ -1.73
TO15178 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
TO15178 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TO15178 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TO15178 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TO15178 RNU6-619P-201ENST00000365146 108 ntBASIC4.23□□□□□ -1.73
TO15178 RNU6-1151P-201ENST00000384684 107 ntBASIC4.23□□□□□ -1.73
TO15178 RPS3AP23-201ENST00000401762 784 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms