Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDHGA6Q9Y5G7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA6Q9Y5G7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDHGA6Q9Y5G7 ELL2P4-201ENST00000446870 1376 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 RNU4-21P-201ENST00000362802 126 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 U3.2-201ENST00000362981 210 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 U3.4-201ENST00000363352 213 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 RNU6-1243P-201ENST00000364028 107 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 Y_RNA.553-201ENST00000384670 102 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 OR8G2P-201ENST00000412796 908 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 ATG4AP1-201ENST00000416893 538 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC093655.2-201ENST00000425735 631 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 VN1R54P-201ENST00000435210 1049 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC073465.2-201ENST00000440938 498 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 RNU6-956P-201ENST00000458868 103 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 RPS15AP17-201ENST00000470598 390 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 ATP5LP5-201ENST00000483050 299 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 HMGB1P40-201ENST00000525121 540 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC068276.1-201ENST00000605793 379 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL031775.1-201ENST00000607014 887 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL445222.1-201ENST00000607259 628 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AC009878.1-201ENST00000621819 340 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL356266.1-201ENST00000623311 483 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 AL356596.1-201ENST00000624230 379 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 LINC01739-205ENST00000641890 573 ntBASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDHGA6Q9Y5G7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.15□□□□□ -1.58
PCDHGA6Q9Y5G7 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RNA5SP305-201ENST00000362665 119 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RNU6-660P-201ENST00000364566 109 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AL353706.1-201ENST00000436728 494 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RPS11P7-201ENST00000442125 465 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AL389915.2-201ENST00000454576 441 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RNA5SP269-201ENST00000459032 137 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC026410.2-201ENST00000460281 156 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RPS20P21-201ENST00000466859 343 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 HMGB1P21-201ENST00000502313 581 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC116347.2-201ENST00000514912 523 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 MTCYBP20-201ENST00000524239 1129 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 OR5D15P-201ENST00000531671 942 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC127381.1-201ENST00000555979 939 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC087763.1-201ENST00000603391 286 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 AC090425.2-201ENST00000608818 501 ntBASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.15□□□□□ -1.59
PCDHGA6Q9Y5G7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms