Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 AL592436.1-201ENST00000605135 558 ntBASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 AC138627.2-201ENST00000624202 601 ntBASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 AC061999.1-201ENST00000624454 177 ntBASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 WDR95P-201ENST00000425638 1542 ntBASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CUEDC1Q9NWM3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AL049780.3-201ENST00000624612 1583 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.5-201ENST00000362334 102 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RNA5SP382-201ENST00000363355 112 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RNA5SP435-201ENST00000364044 108 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RNU1-24P-201ENST00000364285 165 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.530-201ENST00000384587 101 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC026310.1-201ENST00000396004 378 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AL590635.1-201ENST00000406314 586 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 MIR548F5-201ENST00000408421 86 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-1304P-201ENST00000411374 106 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RNU6-603P-201ENST00000411403 107 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 PRELID3BP11-201ENST00000414230 479 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 Z93019.1-201ENST00000416450 973 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC099336.2-201ENST00000422457 254 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AL669831.1-202ENST00000428504 417 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RPS10P21-201ENST00000430654 475 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC099560.2-201ENST00000457554 255 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 GMFBP1-201ENST00000467831 427 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RPL12P20-201ENST00000475538 479 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 TRBV1-201ENST00000476502 284 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RN7SL809P-201ENST00000482040 297 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 Y_RNA.682-201ENST00000516457 100 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RN7SKP96-201ENST00000516948 297 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC090572.1-201ENST00000519251 160 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RANP9-201ENST00000519957 271 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RPL7P20-201ENST00000520308 745 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC007068.2-201ENST00000543168 395 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 HSPE1P2-201ENST00000554777 306 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC004232.1-201ENST00000571388 208 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RPS4XP21-201ENST00000603814 750 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AL499605.1-201ENST00000604628 403 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 FAM157A-202ENST00000615155 405 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC078938.1-201ENST00000620993 318 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 UGT2B27P-201ENST00000505092 1620 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC097504.1-201ENST00000515103 2415 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC090017.1-201ENST00000548612 1779 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 AC112243.1-201ENST00000623949 3851 ntBASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.49□□□□□ -1.37
CUEDC1Q9NWM3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CUEDC1Q9NWM3 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms